RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 MUC15Q8N387 334 aa13.32□□□□□ -0.28
SIN3B-201ENST00000248054 PARD6GQ9BYG4 376 aaPredicted RBP13.32□□□□□ -0.28
SIN3B-201ENST00000248054 C9JQL5 133 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 ZNF506Q5JVG8 444 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 MRPL54Q6P161 138 aaKnown RBP13.31□□□□□ -0.28
SIN3B-201ENST00000248054 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 C12orf77C9JDV5 145 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 DIRC3C9JPN6 131 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 VENTXO95231 258 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 STAG3L2P0CL84 134 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 PPOXP50336 477 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 RSG1Q9BU20 258 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 UTRNP46939 3433 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 E9PLN8 166 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 CELA3BP08861 270 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 HERVK_113P61574 105 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 HSPE1P61604 102 aaKnown RBP13.31□□□□□ -0.28
SIN3B-201ENST00000248054 Q1RN00 199 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM42Q69YG0 159 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 VKORC1Q9BQB6 163 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 ASCL3Q9NQ33 180 aa13.31□□□□□ -0.28
SIN3B-201ENST00000248054 HYPMO75409 117 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 ZNF735P0CB33 412 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
SIN3B-201ENST00000248054 FGFBP3Q8TAT2 258 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 TRBV6-7A0A0A0MS04 114 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 ZNF738Q8NE65 137 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 OR52M1Q8NGK5 317 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 HIGD1AQ9Y241 93 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 RPL8P62917 257 aaKnown RBP13.3□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM116Q8NCL8 245 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM106BQ9NUM4 274 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 SDK2Q58EX2 2172 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 KIF26AQ9ULI4 1882 aaPredicted RBP13.3□□□□□ -0.28
SIN3B-201ENST00000248054 RPL27AP46776 148 aaKnown RBP13.3□□□□□ -0.28
SIN3B-201ENST00000248054 BEND2Q8NDZ0 799 aa13.3□□□□□ -0.28
SIN3B-201ENST00000248054 RNASE6Q93091 150 aaKnown RBP13.3□□□□□ -0.28
SIN3B-201ENST00000248054 A0A087WWC5 75 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 BMPR1BO00238 502 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 SCGB1C2P0DMR2 95 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 MBNL2Q5VZF2 373 aaKnown RBP13.29□□□□□ -0.28
SIN3B-201ENST00000248054 ZNF664Q8N3J9 261 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM140Q9NV12 185 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 RALYQ9UKM9 306 aaKnown RBP13.29□□□□□ -0.28
SIN3B-201ENST00000248054 FREM3P0C091 2139 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 DLL1O00548 723 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 WNT9BO14905 357 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 PRSS1P07477 247 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 NEU4Q8WWR8 484 aaPredicted RBP13.29□□□□□ -0.28
SIN3B-201ENST00000248054 OR4C12Q96R67 309 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 SLC25A33Q9BSK2 321 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM208Q9BTX3 173 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 MMDQ15546 238 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 KBTBD11O94819 623 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 GBGT1Q8N5D6 347 aa13.29□□□□□ -0.28
SIN3B-201ENST00000248054 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 Q6ZS92 163 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 SNRNP40Q96DI7 357 aaKnown RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 C17orf100A8MU93 164 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 NDUFB4O95168 129 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 CLEC2AQ6UVW9 174 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 OR4C13Q8NGP0 309 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 COL25A1Q9BXS0 654 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 IGHV1-18A0A0C4DH31 117 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 MBD3L4A6NDZ8 208 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 MBD3L3A6NE82 208 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 MBD3L5A6NJ08 208 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 A8MWP6 167 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 WNT5AP41221 380 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 KIR2DL2P43627 348 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 MBD3L2Q8NHZ7 208 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 HSPB9Q9BQS6 159 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 ZFP30Q9Y2G7 519 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 A0A0A6YYD4 124 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 LIPFP07098 398 aa13.28□□□□□ -0.28
SIN3B-201ENST00000248054 SRP19P09132 144 aaKnown RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 HINT1P49773 126 aaPredicted RBP13.28□□□□□ -0.28
SIN3B-201ENST00000248054 PPIAL4CA0A0B4J2A2 164 aa13.27□□□□□ -0.28
SIN3B-201ENST00000248054 S1PR2O95136 353 aa13.27□□□□□ -0.28
SIN3B-201ENST00000248054 PPIAL4GP0DN37 164 aa13.27□□□□□ -0.28
SIN3B-201ENST00000248054 SSTR5P35346 364 aa13.27□□□□□ -0.28
SIN3B-201ENST00000248054 KHDC1LQ5JSQ8 128 aa13.27□□□□□ -0.28
SIN3B-201ENST00000248054 ZNF497Q6ZNH5 498 aa13.27□□□□□ -0.28
SIN3B-201ENST00000248054 SVILO95425 2214 aa13.27□□□□□ -0.29
SIN3B-201ENST00000248054 ZNF146Q15072 292 aa13.27□□□□□ -0.29
SIN3B-201ENST00000248054 IBA57Q5T440 356 aaKnown RBP13.27□□□□□ -0.29
SIN3B-201ENST00000248054 CLEC7AQ9BXN2 247 aa13.27□□□□□ -0.29
SIN3B-201ENST00000248054 MRPL32Q9BYC8 188 aaKnown RBP13.27□□□□□ -0.29
SIN3B-201ENST00000248054 KBTBD11-OT1A0A1B0GTJ5 212 aa13.27□□□□□ -0.29
SIN3B-201ENST00000248054 AMBPP02760 352 aa13.27□□□□□ -0.29
SIN3B-201ENST00000248054 PRDM13Q9H4Q3 707 aa13.27□□□□□ -0.29
SIN3B-201ENST00000248054 LINC00614P0C842 121 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 LCN2P80188 198 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 ABHD12Q8N2K0 398 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 OR2D3Q8NGH3 330 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms