RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TCF19Q9Y242 345 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 PXMP4Q9Y6I8 212 aa11.86□□□□□ -0.51
HIF3A-202ENST00000244303 YLPM1P49750 1951 aaKnown RBP11.86□□□□□ -0.51
HIF3A-202ENST00000244303 SNRPCP09234 159 aaKnown RBP11.85□□□□□ -0.51
HIF3A-202ENST00000244303 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 GLRXP35754 106 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 CHRNA7P36544 502 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 TMEM249Q2WGJ8 235 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 TIMM23BQ5SRD1 257 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-202ENST00000244303 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 SOX15O60248 233 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 NDUFB4O95168 129 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-202ENST00000244303 CGB3P0DN86 165 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 CGB7P0DN87 165 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 TMPRSS3P57727 454 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 FAM3BP58499 235 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-202ENST00000244303 CT45A1Q5HYN5 189 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 LINC01551Q86U37 167 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 OR2T10Q8NGZ9 312 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 OR4S2Q8NH73 311 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 CT45A3Q8NHU0 189 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 TMEM37Q8WXS4 190 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 KCNIP2Q9NS61 270 aa11.85□□□□□ -0.51
HIF3A-202ENST00000244303 C15orf61A6NNL5 157 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
HIF3A-202ENST00000244303 GCGP01275 180 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
HIF3A-202ENST00000244303 C1orf185Q5T7R7 199 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 C1orf159Q96HA4 380 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 TRGV8A0A0C4DH27 118 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 PGPEP1LA6NFU8 196 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 RAB7AP51149 207 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
HIF3A-202ENST00000244303 SSMEM1Q8WWF3 244 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
HIF3A-202ENST00000244303 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.51
HIF3A-202ENST00000244303 ZNF292O60281 2723 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 TMPRSS2O15393 492 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 CRYABP02511 175 aaKnown RBP11.83□□□□□ -0.52
HIF3A-202ENST00000244303 PAX1P15863 534 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 ZNF124Q15973 351 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 TMEM204Q9BSN7 226 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 NPVFQ9HCQ7 196 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 SMG1Q96Q15 3661 aaKnown RBP11.83□□□□□ -0.52
HIF3A-202ENST00000244303 IGLV3-9A0A075B6K5 115 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 KBTBD11-OT1A0A1B0GTJ5 212 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 F6UZH7 168 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 ITGB1BP1O14713 200 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 ARSJQ5FYB0 599 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-202ENST00000244303 ACTL10Q5JWF8 245 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 FAM78BQ5VT40 261 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 KCNIP4Q6PIL6 250 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 ZNF114Q8NC26 417 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 TP53TG5Q9Y2B4 290 aa11.83□□□□□ -0.52
HIF3A-202ENST00000244303 LSM4Q9Y4Z0 139 aaKnown RBP11.83□□□□□ -0.52
HIF3A-202ENST00000244303 PLCE1Q9P212 2302 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 DYSFO75923 2080 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 TCAPO15273 167 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 CXorf1O96002 111 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 C1QTNF9P0C862 333 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 TIMP3P35625 211 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 FAM222BQ8WU58 562 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 GCM1Q9NP62 436 aa11.82□□□□□ -0.52
HIF3A-202ENST00000244303 ZFHX2Q9C0A1 2572 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-202ENST00000244303 TYMSP04818 313 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 IL6RP08887 468 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-202ENST00000244303 MYOD1P15172 320 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 NPY1RP25929 384 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 PRSS8Q16651 343 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 TCF23Q7RTU1 214 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 CISD2Q8N5K1 135 aaKnown RBP11.81□□□□□ -0.52
HIF3A-202ENST00000244303 DEFB108BQ8NET1 73 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 TMEM14BQ9NUH8 114 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 FOXA2Q9Y261 457 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-202ENST00000244303 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 CD99P14209 185 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 IL3RAP26951 378 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 GATA4P43694 442 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 THBS3P49746 956 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 GNG10P50151 68 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 MRPS11P82912 194 aaKnown RBP11.81□□□□□ -0.52
HIF3A-202ENST00000244303 COA6Q5JTJ3 125 aaKnown RBP11.81□□□□□ -0.52
HIF3A-202ENST00000244303 STUMQ69YW2 141 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 TEPPQ6URK8 271 aa11.81□□□□□ -0.52
HIF3A-202ENST00000244303 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-202ENST00000244303 BEND2Q8NDZ0 799 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms