RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SRIP30626 198 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 VN1R4Q7Z5H5 301 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 C7orf69Q9H7B7 122 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 C7orf66A4D0T2 115 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 MARCH11A6NNE9 402 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 NPIPB11E5RHQ5 1161 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 FGF12P61328 243 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 ICAM4Q14773 271 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 ZNF721Q8TF20 911 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 HBBP68871 147 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 UNC119Q13432 240 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 SCARF2Q96GP6 870 aaPredicted RBP11.33□□□□□ -0.6
NEK9-201ENST00000238616 AICDAQ9GZX7 198 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 CD7P09564 240 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 FAM71F2Q6NXP2 309 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 KIR3DL3Q8N743 410 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 H7C1H1 209 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 FGF9P31371 208 aaPredicted RBP11.33□□□□□ -0.6
NEK9-201ENST00000238616 TMEM74BQ9NUR3 256 aa11.33□□□□□ -0.6
NEK9-201ENST00000238616 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 IGHV3-11P01762 117 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 TRGC2P03986 189 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 NPC2P61916 151 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 ODAMA1E959 279 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 NOVP48745 357 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 SCAND1P57086 179 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 H1FOOQ8IZA3 346 aaPredicted RBP11.32□□□□□ -0.6
NEK9-201ENST00000238616 KLF14Q8TD94 323 aaPredicted RBP11.32□□□□□ -0.6
NEK9-201ENST00000238616 TMEM106BQ9NUM4 274 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 LINC00299Q6ZSB3 139 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 KCNK7Q9Y2U2 307 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
NEK9-201ENST00000238616 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 MGST3O14880 152 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 HLA-DRB1P01911 266 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 SCGB3A1Q96QR1 104 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 AHDC1Q5TGY3 1603 aaPredicted RBP11.32□□□□□ -0.6
NEK9-201ENST00000238616 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
NEK9-201ENST00000238616 PEX7O00628 323 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 HOXA3O43365 443 aaPredicted RBP11.32□□□□□ -0.6
NEK9-201ENST00000238616 BCL2P10415 239 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 BSPH1Q075Z2 132 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 CDCP2Q5VXM1 449 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 TRGV4A0A0C4DH28 118 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 H0Y980 276 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
NEK9-201ENST00000238616 NPIPB4C9JG80 1138 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 SYNGR3O43761 229 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 OR4D11Q8NGI4 311 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 DSCAMO60469 2012 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 A0A1W2PQD3 144 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 EDIL3O43854 480 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 FAM209BQ5JX69 171 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 TRAF4Q9BUZ4 470 aaPredicted RBP11.31□□□□□ -0.6
NEK9-201ENST00000238616 ZNF414Q96IQ9 312 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 LRRC3BQ96PB8 259 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 DNM1P46Q6ZS02 220 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 TUBD1Q9UJT1 453 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 NDUFA2O43678 99 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 GFI1BQ5VTD9 330 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 LHX2P50458 406 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 GCSAMQ8N6F7 178 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 DTX4Q9Y2E6 619 aa11.31□□□□□ -0.6
NEK9-201ENST00000238616 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
NEK9-201ENST00000238616 SRSF7Q16629 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEK9-201ENST00000238616 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 CKS1BP61024 79 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 A0A0J9YW62 118 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 IGLV3-16A0A075B6K0 115 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 ASIPP42127 132 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 TMEM45BQ96B21 275 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 RIPPLY3P57055 190 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 LINC01465Q8N7H1 131 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 RARRES2Q99969 163 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 EDA2RQ9HAV5 297 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 LOC390937A0A1W2PQ73 354 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 PEMTQ9UBM1 199 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
NEK9-201ENST00000238616 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
NEK9-201ENST00000238616 NHSL1Q5SYE7 1610 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 ASCL4Q6XD76 172 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms