RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PRDM13Q9H4Q3 707 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 ATRAIDQ6UW56 229 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 CRIM1Q9NZV1 1036 aa9.56□□□□□ -0.88
MSH6-201ENST00000234420 ADAMTSL1Q8N6G6 1762 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 C21orf140B9A014 251 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 DCAF10Q5QP82 559 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 TANC2Q9HCD6 1990 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 PPIAL4CA0A0B4J2A2 164 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 PPIAL4GP0DN37 164 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 NUTF2P61970 127 aaKnown RBP9.55□□□□□ -0.88
MSH6-201ENST00000234420 C1orf43Q9BWL3 253 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 TMEM56-RWDD3S4R434 201 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 TMEM106BQ9NUM4 274 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 A0A0B4J2E0 115 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 MUC21A0A0G2JKD1 596 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 MUC21A0A140T8X8 626 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 A0A1B0GX12 115 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 MUC21Q5SSG8 566 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 TMEM186Q96B77 213 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
MSH6-201ENST00000234420 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
MSH6-201ENST00000234420 MARCH11A6NNE9 402 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
MSH6-201ENST00000234420 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
MSH6-201ENST00000234420 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 GATA4P43694 442 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 ANXA2RQ3ZCQ2 193 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 SAP30O75446 220 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 SELENOHQ8IZQ5 122 aaKnown RBP9.55□□□□□ -0.88
MSH6-201ENST00000234420 SLC25A15Q9Y619 301 aa9.55□□□□□ -0.88
MSH6-201ENST00000234420 C8orf46Q8TAG6 207 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 ITLN1Q8WWA0 313 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.88
MSH6-201ENST00000234420 KNDC1Q76NI1 1749 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 A0A1W2PS18 150 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 CTSVO60911 334 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 C10orf111Q8N326 155 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 PNKDQ8N490 385 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 FDCSPQ8NFU4 85 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 MVB12AQ96EY5 273 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 ZNF407Q9C0G0 2248 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 WDYHV1Q96HA8 205 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 ZNF479Q96JC4 524 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 CACNA1EQ15878 2313 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 SBF1O95248 1867 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 SYNGR1O43759 233 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 ZBTB34Q8NCN2 500 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 OR52E5Q8NH55 327 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 MGST2Q99735 147 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
MSH6-201ENST00000234420 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 MESTQ5EB52 335 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 SPSB4Q96A44 273 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 RASL10BQ96S79 203 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 NRN1Q9NPD7 142 aa9.54□□□□□ -0.88
MSH6-201ENST00000234420 CENPWQ5EE01 88 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 LHX8Q68G74 356 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 ZNF826PQ6ZT77 177 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
MSH6-201ENST00000234420 LINC01387J3KSC0 135 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 CD24P25063 80 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 Q5BKY6 102 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 FAM60AQ9NP50 221 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 G6PC2Q9NQR9 355 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 CDC42EP2O14613 210 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 OGG1O15527 345 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 STRCQ7RTU9 1775 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 PSG1P11464 419 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 COLCA1Q6ZS62 124 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 NCOR1O75376 2440 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 SERF1AO75920 110 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 C2orf16Q68DN1 1984 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 LILRA5A6NI73 299 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 ZXDCQ2QGD7 858 aaPredicted RBP9.53□□□□□ -0.88
MSH6-201ENST00000234420 VKORC1Q9BQB6 163 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 ZNF236Q9UL36 1845 aa9.53□□□□□ -0.88
MSH6-201ENST00000234420 F5P12259 2224 aa9.52□□□□□ -0.88
MSH6-201ENST00000234420 CNTFRP26992 372 aa9.52□□□□□ -0.88
MSH6-201ENST00000234420 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.88
MSH6-201ENST00000234420 SLC25A2Q9BXI2 301 aa9.52□□□□□ -0.88
MSH6-201ENST00000234420 EPDR1Q9UM22 224 aa9.52□□□□□ -0.88
MSH6-201ENST00000234420 DPTQ07507 201 aa9.52□□□□□ -0.88
MSH6-201ENST00000234420 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 HEATR5AQ86XA9 2040 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 K7N7A8 449 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 TBX6O95947 436 aaPredicted RBP9.52□□□□□ -0.89
MSH6-201ENST00000234420 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 SLC25A20O43772 301 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 DANCRP0C864 163 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 ISXQ2M1V0 245 aa9.52□□□□□ -0.89
MSH6-201ENST00000234420 SHISA5Q8N114 240 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 OR2H1Q9GZK4 316 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 HRKO00198 91 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 ATP5LO75964 103 aa9.51□□□□□ -0.89
MSH6-201ENST00000234420 RND2P52198 227 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms