RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 C1orf159Q96HA4 380 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 SNHG12Q9BXW3 62 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 ASCL3Q9NQ33 180 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
LTBR-201ENST00000228918 LSM4Q9Y4Z0 139 aaKnown RBP13.42□□□□□ -0.26
LTBR-201ENST00000228918 C15orf61A6NNL5 157 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 ITGB1BP1O14713 200 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 CXorf1O96002 111 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 C1QTNF9P0C862 333 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 CGB3P0DN86 165 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 CGB7P0DN87 165 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 ZNF83P51522 516 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 SDSLQ96GA7 329 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 NBEAQ8NFP9 2946 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 DSCAMO60469 2012 aa13.42□□□□□ -0.26
LTBR-201ENST00000228918 PGPEP1LA6NFU8 196 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 LHBP01229 141 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 RAB4AP20338 218 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 RAB7AP51149 207 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 C17orf58Q2M2W7 97 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 CYB5R2Q6BCY4 276 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 IMMP2LQ96T52 175 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 TANC2Q9HCD6 1990 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 CADP27708 2225 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 TRBV20OR9-2A0A075B6H5 130 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 MBD3L4A6NDZ8 208 aaPredicted RBP13.41□□□□□ -0.26
LTBR-201ENST00000228918 MBD3L3A6NE82 208 aaPredicted RBP13.41□□□□□ -0.26
LTBR-201ENST00000228918 MBD3L5A6NJ08 208 aaPredicted RBP13.41□□□□□ -0.26
LTBR-201ENST00000228918 ZNF705GA8MUZ8 300 aaPredicted RBP13.41□□□□□ -0.26
LTBR-201ENST00000228918 RPL15P61313 204 aaKnown RBP13.41□□□□□ -0.26
LTBR-201ENST00000228918 PRSS8Q16651 343 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 MBD3L2Q8NHZ7 208 aaPredicted RBP13.41□□□□□ -0.26
LTBR-201ENST00000228918 LEAP2Q969E1 77 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 NPVFQ9HCQ7 196 aa13.41□□□□□ -0.26
LTBR-201ENST00000228918 SVILO95425 2214 aa13.4□□□□□ -0.26
LTBR-201ENST00000228918 SAA2-SAA4A0A096LPE2 208 aa13.4□□□□□ -0.26
LTBR-201ENST00000228918 SAA2P0DJI9 122 aaPredicted RBP13.4□□□□□ -0.26
LTBR-201ENST00000228918 G0S2P27469 103 aa13.4□□□□□ -0.26
LTBR-201ENST00000228918 ARSJQ5FYB0 599 aaPredicted RBP13.4□□□□□ -0.26
LTBR-201ENST00000228918 PIP4P1Q86T03 277 aa13.4□□□□□ -0.26
LTBR-201ENST00000228918 NCOR1P1Q9H4R4 102 aa13.4□□□□□ -0.26
LTBR-201ENST00000228918 M0R1B8 84 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 IL6RP08887 468 aaPredicted RBP13.39□□□□□ -0.27
LTBR-201ENST00000228918 KLF3P57682 345 aaPredicted RBP13.39□□□□□ -0.27
LTBR-201ENST00000228918 CT45A1Q5HYN5 189 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 CT45A3Q8NHU0 189 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 ITLN1Q8WWA0 313 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 SSMEM1Q8WWF3 244 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 SFRP2Q96HF1 295 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 BTF3L4Q96K17 158 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 FOXA2Q9Y261 457 aaPredicted RBP13.39□□□□□ -0.27
LTBR-201ENST00000228918 SCO2A0A1W2PP80 73 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 NPY1RP25929 384 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 GLRXP35754 106 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 FOXL1Q12952 345 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 OR4A47Q6IF82 309 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 ALKBH2Q6NS38 261 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.39□□□□□ -0.27
LTBR-201ENST00000228918 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 TMEM14BQ9NUH8 114 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 ZFHX4Q86UP3 3567 aa13.39□□□□□ -0.27
LTBR-201ENST00000228918 A0A0U1RQK1 487 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 MDFIC2A0A1B0GVS7 189 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 ZNF320A2RRD8 509 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 SPRY3O43610 288 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 CNN1P51911 297 aaKnown RBP13.38□□□□□ -0.27
LTBR-201ENST00000228918 FAM201AQ5SY85 155 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 TMEM204Q9BSN7 226 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 RAB9BQ9NP90 201 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 YTHDF2Q9Y5A9 579 aaKnown RBP13.38□□□□□ -0.27
LTBR-201ENST00000228918 KBTBD11-OT1A0A1B0GTJ5 212 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 M0R143 59 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 FTH1P19P0C7X4 201 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 THBS3P49746 956 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 HSPE1P61604 102 aaKnown RBP13.38□□□□□ -0.27
LTBR-201ENST00000228918 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 TEPPQ6URK8 271 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 STPG3Q8N7X2 389 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 FAM222BQ8WU58 562 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 CHODLQ9H9P2 273 aa13.38□□□□□ -0.27
LTBR-201ENST00000228918 GCHFRP30047 84 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 TDGF1P3P51864 188 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 EFNB3Q15768 340 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 SPATA31B1PQ5VZV4 182 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 ZNF474Q6S9Z5 364 aaPredicted RBP13.37□□□□□ -0.27
LTBR-201ENST00000228918 DEFB124Q8NES8 71 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 SGMS2Q8NHU3 365 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 ELOVL5Q9NYP7 299 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 IDI2-AS1Q9NZ38 188 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 RAI1Q7Z5J4 1906 aaPredicted RBP13.37□□□□□ -0.27
LTBR-201ENST00000228918 IGLV3-9A0A075B6K5 115 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 OR4A8P0C604 315 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 GATA4P43694 442 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 RHOBP62745 196 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 DEFB109BQ30KR1 87 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 DUX4L9Q6RFH8 374 aaPredicted RBP13.37□□□□□ -0.27
LTBR-201ENST00000228918 VHLLQ6RSH7 139 aa13.37□□□□□ -0.27
LTBR-201ENST00000228918 ZNF439Q8NDP4 499 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms