RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 CXorf1O96002 111 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 PPIAL4FP0DN26 164 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HSPE1P61604 102 aaKnown RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 MORN2Q502X0 79 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 PEAR1Q5VY43 1037 aaPredicted RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 P2RX4Q99571 388 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 PPIAL4AQ9Y536 164 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BKO60814 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BJP06899 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BOP23527 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BBP33778 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BDP58876 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BCP62807 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST2H2BEQ16778 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 TGIF2LYQ8IUE0 185 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 CMTM2Q8TAZ6 248 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BHQ93079 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BNQ99877 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HIST1H2BMQ99879 126 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 ELOVL1Q9BW60 279 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 MRPL37Q9BZE1 423 aaKnown RBP11.32□□□□□ -0.6
RAB3D-201ENST00000222120 FKBP11Q9NYL4 201 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 ONECUT1Q9UBC0 465 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 PRNDQ9UKY0 176 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 IGF2RP11717 2491 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 CA2P00918 260 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 TDGF1P13385 188 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 MYOD1P15172 320 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 CCL3L1P16619 93 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 PMCHP20382 165 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 IER3P46695 156 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 CLCF1Q9UBD9 225 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 MYO15AQ9UKN7 3530 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 ATRXP46100 2492 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 RNF151Q2KHN1 245 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 NHLRC2Q8NBF2 726 aa11.32□□□□□ -0.6
RAB3D-201ENST00000222120 PDE6DO43924 150 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
RAB3D-201ENST00000222120 Q6ZS49 121 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 RNF115Q9Y4L5 304 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 TRAV34A0A0B4J273 112 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 HELTA6NFD8 242 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 Q6ZR03 302 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 OR1B1Q8NGR6 318 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 ANAPC16Q96DE5 110 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 HSPB7Q9UBY9 170 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 RBP4P02753 201 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 CAMPP49913 170 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 SRSF7Q16629 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB3D-201ENST00000222120 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 VAMP8Q9BV40 100 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 WDFY4Q6ZS81 3184 aa11.31□□□□□ -0.6
RAB3D-201ENST00000222120 SLC25A17O43808 307 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 CD81P60033 236 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 GCSAMQ8N6F7 178 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 OR1P1Q8NH06 330 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 RPEQ96AT9 228 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 IGFBP2P18065 325 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 WT1P19544 449 aaPredicted RBP11.3□□□□□ -0.6
RAB3D-201ENST00000222120 CD40P25942 277 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 LGALS4P56470 323 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 FXYD3Q14802 87 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 OR4X1Q8NH49 305 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 ABHD17AQ96GS6 310 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 TECRQ9NZ01 308 aaKnown RBP11.3□□□□□ -0.6
RAB3D-201ENST00000222120 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 PAM16Q9Y3D7 125 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 H3BTX0 84 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 PLA2G5P39877 138 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
RAB3D-201ENST00000222120 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 ZNRD1Q9P1U0 126 aa11.3□□□□□ -0.6
RAB3D-201ENST00000222120 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
RAB3D-201ENST00000222120 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 SAA2P0DJI9 122 aaPredicted RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CRYBB3P26998 211 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 RANP62826 216 aaKnown RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 C1orf162Q8NEQ5 155 aaPredicted RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 PPIHO43447 177 aaKnown RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms