RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 IQCJQ1A5X6 159 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 SPATA31B1PQ5VZV4 182 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 LRP11Q86VZ4 500 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 LEAP2Q969E1 77 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 NPVFQ9HCQ7 196 aa14.25□□□□□ -0.13
USB1-201ENST00000219281 PRR33A8MZF0 331 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 SRRM5B3KS81 715 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 SCGB1D1O95968 90 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 IGLV1-44P01699 117 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 IL6RP08887 468 aaPredicted RBP14.24□□□□□ -0.13
USB1-201ENST00000219281 ADMP35318 185 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 SPRNQ5BIV9 151 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 ARSJQ5FYB0 599 aaPredicted RBP14.24□□□□□ -0.13
USB1-201ENST00000219281 ALKBH2Q6NS38 261 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 OR10G8Q8NGN5 311 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 SEPSECSQ9HD40 501 aaKnown RBP14.24□□□□□ -0.13
USB1-201ENST00000219281 FKBP11Q9NYL4 201 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 LSM4Q9Y4Z0 139 aaKnown RBP14.24□□□□□ -0.13
USB1-201ENST00000219281 MGAQ8IWI9 3026 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 TRAV17A0A0B4J275 112 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 TM4SF5O14894 197 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 GCHFRP30047 84 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 TIMP3P35625 211 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 MZT1Q08AG7 82 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 MSMPQ1L6U9 139 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 BEND2Q8NDZ0 799 aa14.24□□□□□ -0.13
USB1-201ENST00000219281 OPN3Q9H1Y3 402 aaPredicted RBP14.24□□□□□ -0.13
USB1-201ENST00000219281 FOXH1O75593 365 aa14.23□□□□□ -0.13
USB1-201ENST00000219281 EFNB3Q15768 340 aa14.23□□□□□ -0.13
USB1-201ENST00000219281 TEX38Q6PEX7 206 aa14.23□□□□□ -0.13
USB1-201ENST00000219281 GCSAMQ8N6F7 178 aa14.23□□□□□ -0.13
USB1-201ENST00000219281 PPP1R35Q8TAP8 253 aa14.23□□□□□ -0.13
USB1-201ENST00000219281 HCFC1P51610 2035 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 F2RL2O00254 374 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 CR1LQ2VPA4 569 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 HLA-DRB5Q30154 266 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 LBHQ53QV2 105 aaPredicted RBP14.22□□□□□ -0.13
USB1-201ENST00000219281 STPG3Q8N7X2 389 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 DDB2Q92466 427 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 TRGV8A0A0C4DH27 118 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 A0A1B0GWJ7 208 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 CEACAM4O75871 244 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 KIR2DS2P43631 304 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 RPL31P62899 125 aaKnown RBP14.22□□□□□ -0.13
USB1-201ENST00000219281 TEPPQ6URK8 271 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 OR4S2Q8NH73 311 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 PLSCR4Q9NRQ2 329 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 CALYQ9NYX4 217 aa14.22□□□□□ -0.13
USB1-201ENST00000219281 GRIFINA4D1Z8 144 aa14.21□□□□□ -0.13
USB1-201ENST00000219281 C15orf61A6NNL5 157 aa14.21□□□□□ -0.13
USB1-201ENST00000219281 K7EN84 100 aa14.21□□□□□ -0.13
USB1-201ENST00000219281 SLC17A3O00476 420 aa14.21□□□□□ -0.13
USB1-201ENST00000219281 YPEL3P61236 119 aaPredicted RBP14.21□□□□□ -0.13
USB1-201ENST00000219281 ZNF90Q03938 601 aa14.21□□□□□ -0.13
USB1-201ENST00000219281 AKAP13Q12802 2813 aa14.21□□□□□ -0.13
USB1-201ENST00000219281 NPY1RP25929 384 aa14.21□□□□□ -0.14
USB1-201ENST00000219281 RHOBP62745 196 aa14.21□□□□□ -0.14
USB1-201ENST00000219281 MOGAT3Q86VF5 341 aa14.21□□□□□ -0.14
USB1-201ENST00000219281 SLC24A4Q8NFF2 622 aa14.21□□□□□ -0.14
USB1-201ENST00000219281 MS4A10Q96PG2 267 aa14.21□□□□□ -0.14
USB1-201ENST00000219281 TP53TG5Q9Y2B4 290 aa14.21□□□□□ -0.14
USB1-201ENST00000219281 TET2Q6N021 2002 aaPredicted RBP14.2□□□□□ -0.14
USB1-201ENST00000219281 CA2P00918 260 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 SELLP14151 372 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 MYOD1P15172 320 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 CBLN1P23435 193 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 RAB4BP61018 213 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 CT45A1Q5HYN5 189 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 OR4A47Q6IF82 309 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 BHLHA15Q7RTS1 189 aaPredicted RBP14.2□□□□□ -0.14
USB1-201ENST00000219281 OR4P4Q8NGL7 312 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 CT45A3Q8NHU0 189 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 FAM216AQ8WUB2 273 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 OR2V2Q96R30 315 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 ZNF71Q9NQZ8 489 aaPredicted RBP14.2□□□□□ -0.14
USB1-201ENST00000219281 SVILO95425 2214 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 EREGO14944 169 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 HSPE1P61604 102 aaKnown RBP14.2□□□□□ -0.14
USB1-201ENST00000219281 C17orf58Q2M2W7 97 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 FAM201AQ5SY85 155 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 SARAFQ96BY9 339 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 HINT2Q9BX68 163 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 ENY2Q9NPA8 101 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 IL36BQ9NZH7 164 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 NAGKQ9UJ70 344 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 PROCRQ9UNN8 238 aa14.2□□□□□ -0.14
USB1-201ENST00000219281 GVINP1Q7Z2Y8 2422 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 CEP250Q9BV73 2442 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 SAA2-SAA4A0A096LPE2 208 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 SAA2P0DJI9 122 aaPredicted RBP14.19□□□□□ -0.14
USB1-201ENST00000219281 IGFBP2P18065 325 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 TGIF2LXQ8IUE1 241 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 CMTM2Q8TAZ6 248 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 STARD4Q96DR4 205 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 CHODLQ9H9P2 273 aa14.19□□□□□ -0.14
USB1-201ENST00000219281 POLR3KQ9Y2Y1 108 aaPredicted RBP14.19□□□□□ -0.14
USB1-201ENST00000219281 TNFSF13O75888 250 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 ACTL6BO94805 426 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 MT-CO2P00403 227 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 ZNF83P51522 516 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms