RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TREML4Q6UXN2 200 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 RAB1CQ92928 201 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 NEIL1Q96FI4 390 aaPredicted RBP6.76□□□□□ -1.33
VAMP3-201ENST00000054666 SMIM7Q9BQ49 75 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 MRPL20Q9BYC9 149 aaKnown RBP6.76□□□□□ -1.33
VAMP3-201ENST00000054666 NPVFQ9HCQ7 196 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 BET1LQ9NYM9 111 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 KAAG1Q9UBP8 84 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 PKDREJQ9NTG1 2253 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 ROS1P08922 2347 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 TET2Q6N021 2002 aaPredicted RBP6.76□□□□□ -1.33
VAMP3-201ENST00000054666 TRBV23-1A0A0A0MS06 115 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 CXorf65A6NEN9 183 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 PRSS46E5RG02 174 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 UPK2O00526 184 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
VAMP3-201ENST00000054666 KBTBD11O94819 623 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 IGKV1-16P04430 117 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 SAA1P0DJI8 122 aaPredicted RBP6.76□□□□□ -1.33
VAMP3-201ENST00000054666 IL3RAP26951 378 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 AKR1D1P51857 326 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 PRCDQ00LT1 54 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 TEPPQ6URK8 271 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 LYPD2Q6UXB3 125 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 OR5B3Q8NH48 314 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM186Q96B77 213 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 ZNRD1Q9P1U0 126 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 CTSZQ9UBR2 303 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 PXMP4Q9Y6I8 212 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 SEC14L6B5MCN3 397 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 H0YJW9 148 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 CA2P00918 260 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 LOXP28300 417 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-201ENST00000054666 HABP2Q14520 560 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF674Q2M3X9 581 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 PDPNQ86YL7 162 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 MUC15Q8N387 334 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 LINC00311Q8N616 119 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 C8orf31Q8N9H6 132 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 OR4F5Q8NH21 305 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 VSTM2AQ8TAG5 236 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 LINC01560Q8TB33 94 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 FLYWCH2Q96CP2 140 aaKnown RBP6.75□□□□□ -1.33
VAMP3-201ENST00000054666 OR4F4Q96R69 305 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 MGST2Q99735 147 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 GGTLC1Q9BX51 225 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 TMPRSS5Q9H3S3 457 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 NAT8Q9UHE5 227 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 DCHS1Q96JQ0 3298 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 PIEZO2Q9H5I5 2752 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 ATMQ13315 3056 aa6.75□□□□□ -1.33
VAMP3-201ENST00000054666 FNDC10F2Z333 226 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 REG1BP48304 166 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 ATP5IP56385 69 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 CD81P60033 236 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 ERVFRD-1P60508 538 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 B2MP61769 119 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM155Q4W5P6 130 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 CYP2G1PQ6ZSU1 146 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 OR4C13Q8NGP0 309 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 OR9G1Q8NH87 305 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM170AQ8WVE7 144 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 MALSU1Q96EH3 234 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 COMMD5Q9GZQ3 224 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 POLEQ07864 2286 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 SPTA1P02549 2419 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 TNFRSF13BO14836 293 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 USF1P22415 310 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 ADIRFQ15847 76 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM177Q53S58 311 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 MIC13Q5XKP0 118 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 WDR25Q64LD2 544 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 TGIF2LXQ8IUE1 241 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 Q8N7P7 452 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 OR5AN1Q8NGI8 311 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 OR4A5Q8NH83 315 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 PATZ1Q9HBE1 687 aaKnown RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 SDF2L1Q9HCN8 221 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 WASHC3Q9Y3C0 194 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 ARFGEF3Q5TH69 2177 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 TLN1Q9Y490 2541 aaKnown RBP6.74□□□□□ -1.33
VAMP3-201ENST00000054666 CEP295Q9C0D2 2601 aa6.74□□□□□ -1.33
VAMP3-201ENST00000054666 C11orf94C9JXX5 98 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 CLDN34H7C241 214 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 PAGE4O60829 102 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 FCN3O75636 299 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 MT-CO2P00403 227 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 PLAUP00749 431 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 OPN1MWP04001 364 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 IL6RP08887 468 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 OPN1MW2P0DN77 364 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 OPN1MW3P0DN78 364 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 IGHV1-8P0DP01 117 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 DEFA4P12838 97 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 MYOD1P15172 320 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 AGAP20933 346 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 MAS1LP35410 378 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms