RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-280	ENST00000636751	TMEM116	Q8NCL8	245 aa		4.17	□□□□□ -1.74
TCF4-280	ENST00000636751	MARS2	Q96GW9	593 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-280	ENST00000636751	PRR14	Q9BWN1	585 aa		4.17	□□□□□ -1.74
TCF4-280	ENST00000636751	NPVF	Q9HCQ7	196 aa		4.17	□□□□□ -1.74
TCF4-280	ENST00000636751	DNAJB12	Q9NXW2	375 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-280	ENST00000636751	TRBV9	A0A0B4J1U6	114 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	RAMP3	O60896	148 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	VENTX	O95231	258 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ZNF250	P15622	560 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ADM	P35318	185 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ZNF260	Q3ZCT1	412 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	HAPLN4	Q86UW8	402 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	PIGC	Q92535	297 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	C1QTNF6	Q9BXI9	259 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	SELENOI	Q9C0D9	397 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	IKZF5	Q9H5V7	419 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CTAG2	O75638	210 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TUSC2	O75896	110 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	IGHG3	P01860	377 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	HBZ	P02008	142 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	PTGDS	P41222	190 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TBR1	Q16650	682 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	RNF144B	Q7Z419	303 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	LHX4	Q969G2	390 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	GALM	Q96C23	342 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	POM121L2	Q96KW2	1035 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TAAR6	Q96RI8	345 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TRAV18	A0A075B6X5	111 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	KRAS	P01116	189 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MMP9	P14780	707 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	GABRB1	P18505	474 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ZNF93	P35789	620 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TNFAIP6	P98066	277 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CPO	Q8IVL8	374 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CCL4L1	Q8NHW4	92 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MRM2	Q9UI43	246 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	HELZ2	Q9BYK8	2649 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TRDV1	A0A1B0GX56	115 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751		A0A1W2PQM1	296 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751		A0A1W2PRS3	328 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751		H3BUT2	72 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	RPS4Y1	P22090	263 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	KIR2DL2	P43627	348 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CNN1	P51911	297 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	FABP5	Q01469	135 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TCF24	Q7RTU0	167 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	DTX2	Q86UW9	622 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	OR5AS1	Q8N127	324 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	NANOGP1	Q8N7R0	232 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	HINT3	Q9NQE9	182 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ICAM5	Q9UMF0	924 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	DSPP	Q9NZW4	1301 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	LOC100289279	A0A1B0GTE1	492 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	FAM157A	C9JC47	383 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	PRKN	O60260	465 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	RBMY1C	P0DJD4	496 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	VSIG10L2	P0DP72	767 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	ERH	P84090	104 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TCF15	Q12870	199 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MIDN	Q504T8	468 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	PUSL1	Q8N0Z8	303 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	GCSAM	Q8N6F7	178 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	OR2T10	Q8NGZ9	312 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	RFESD	Q8TAC1	157 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MZB1	Q8WU39	189 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CNRIP1	Q96F85	164 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TRBV20-1	A0A075B6N2	111 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MBD3L3	A6NE82	208 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MS4A18	H0YCH9	400 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CRYGC	P07315	174 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	HTR6	P50406	440 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MS4A18	Q3C1V0	323 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	FBXL19-AS1	Q494R0	122 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	GAGE13	Q4V321	117 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	PNPLA1	Q8N8W4	532 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	OR51S1	Q8NGJ8	323 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	SLC25A33	Q9BSK2	321 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CSTL1	Q9H114	145 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751		V9GY05	133 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	C22orf46	C9J442	243 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TGFBR3L	H3BV60	316 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	PLPP3	O14495	311 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CDIPT	O14735	213 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	HIST1H1B	P16401	226 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	CD40	P25942	277 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	LGALS7	P47929	136 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	MMP16	P51512	607 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	BAALC	Q8WXS3	180 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	NDUFAF3	Q9BU61	184 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TTTY10	Q9BZA0	68 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	NECAP2	Q9NVZ3	263 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	TAAR3P	Q9P1P4	343 aa		4.16	□□□□□ -1.74
TCF4-280	ENST00000636751	FOXS1	O43638	330 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	PPP1R3D	O95685	299 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ANOS1	P23352	680 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	MORN3	Q6PF18	240 aa	Predicted RBP	4.15	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms