RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	RBM14	Q96PK6	669 aa	Known RBP	12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SLC35B3	Q9H1N7	401 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	DCAF16	Q9NXF7	216 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	PITPNC1	Q9UKF7	332 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997		S4R3C0	116 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RNF223	E7ERA6	249 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SELL	P14151	372 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	HIST1H2BA	Q96A08	127 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TMEM140	Q9NV12	185 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C17orf100	A8MU93	164 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	OR10J1	P30954	320 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GCSAM	Q8N6F7	178 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997		Q8WTZ3	238 aa		12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.08	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM157C	P0CG43	387 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TEPP	Q6URK8	271 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TP53RK	Q96S44	253 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	OR2A4	O95047	310 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SUMO1	P63165	101 aa	Known RBP	12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TMEM241	Q24JQ0	296 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	PACRG	Q96M98	296 aa	Predicted RBP	12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997		Q96MF0	132 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	OR2A7	Q96R45	310 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A10P	A6NDY2	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A18P	A6NE21	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A16P	A6NEW6	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RBFOX3	A6NFN3	312 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A20P	A6NIJ5	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A8P	A6NJQ4	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A7P	A6NKC0	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A22P	A8MWA6	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A12P	A8MX19	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A5P	A8MXJ8	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A23P	A8MXZ1	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A15P	P0C7V4	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A13P	P0C7W8	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A14P	P0C7W9	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM90A24P	P0C7X0	464 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997	ATG101	Q9BSB4	218 aa		12.07	□□□□□ -0.48
NEDD4L-238	ENST00000635997		H0Y980	276 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997		H3BTX0	84 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	LIPF	P07098	398 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CD1B	P29016	333 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GNG4	P50150	75 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	UNQ5815/PRO19632	Q6UWF5	114 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	ZNF645	Q8N7E2	425 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	OR9G1	Q8NH87	305 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	STARD4	Q96DR4	205 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	AUP1	Q9Y679	476 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	DOCK11	Q5JSL3	2073 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TMSB15B	A0A087X1C1	80 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C11orf94	C9JXX5	98 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	PDPN	Q86YL7	162 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	COMMD1	Q8N668	190 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GPR61	Q9BZJ8	451 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997		A6NNC1	897 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	OR2J3	O76001	311 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RPRML	Q8N4K4	120 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	IGHV1-18	A0A0C4DH31	117 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	LY6H	O94772	140 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RND2	P52198	227 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RNF144B	Q7Z419	303 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MYPOP	Q86VE0	399 aa	Predicted RBP	12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MAPK1IP1L	Q8NDC0	245 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RSPO3	Q9BXY4	272 aa	Predicted RBP	12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	WASHC3	Q9Y3C0	194 aa		12.06	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SS18L1	O75177	396 aa	Predicted RBP	12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	HSPB1	P04792	205 aa	Known RBP	12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MC5R	P33032	325 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	EFNA4	P52798	201 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	ZNF880	Q6PDB4	577 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SAXO1	Q8IYX7	474 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	BTF3L4	Q96K17	158 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TECR	Q9NZ01	308 aa	Known RBP	12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	DNAH12	Q6ZR08	3092 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GBF1	Q92538	1859 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	IGHV3OR16-8	A0A075B7F1	116 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	SH2D7	A6NKC9	451 aa	Predicted RBP	12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	THBD	P07204	575 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TNC	P24821	2201 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997		M0R143	59 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	ZNF66	Q6ZN08	573 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	OR4C12	Q96R67	309 aa		12.05	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CEACAM18	A8MTB9	384 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	FAM106CP	P0CH98	169 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	MDK	P21741	143 aa	Predicted RBP	12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	GAS1	P54826	345 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	LOXL3	P58215	753 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	C5orf24	Q7Z6I8	188 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	TXN2	Q99757	166 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	RBKS	Q9H477	322 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	KIAA1671	Q9BY89	1806 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	XKRY2	A2RUG3	117 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CGB1	A6NKQ9	187 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997		F5H697	171 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	PLAUR	Q03405	335 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	PLPPR1	Q8TBJ4	325 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	CLEC7A	Q9BXN2	247 aa		12.04	□□□□□ -0.48
NEDD4L-238	ENST00000635997	YLPM1	P49750	1951 aa	Known RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 390.8 ms