RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 BSPH1Q075Z2 132 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 IRF3Q14653 427 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 LINC00305Q7Z4B0 112 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 MRPL18Q9H0U6 180 aaKnown RBP10.03□□□□□ -0.8
SHPRH-211ENST00000629427 CADP27708 2225 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 NYNRINQ9P2P1 1898 aaKnown RBP10.03□□□□□ -0.8
SHPRH-211ENST00000629427 Q6ZT83 130 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 SAXO1Q8IYX7 474 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 ZNF146Q15072 292 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 TIMM23BQ5SRD1 257 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 DOCK4Q8N1I0 1966 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 TMEM45BQ96B21 275 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 RIPPLY2Q5TAB7 128 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 TCF24Q7RTU0 167 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 TRAF4Q9BUZ4 470 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-211ENST00000629427 CFHR5Q9BXR6 569 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 MRPL13Q9BYD1 178 aaKnown RBP10.03□□□□□ -0.8
SHPRH-211ENST00000629427 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 FAM206AQ9NX38 181 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 DOCK10Q96BY6 2186 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 RECKO95980 971 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 CRYBB3P26998 211 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 DUX3Q96PT4 197 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 F11RQ9Y624 299 aaKnown RBP10.03□□□□□ -0.8
SHPRH-211ENST00000629427 LEPROTL1O95214 131 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 CRYBA2P53672 197 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 ZNF79Q15937 498 aa10.03□□□□□ -0.8
SHPRH-211ENST00000629427 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.8
SHPRH-211ENST00000629427 DNAL4O96015 105 aa10.02□□□□□ -0.8
SHPRH-211ENST00000629427 MUC1P15941 1255 aaPredicted RBP10.02□□□□□ -0.8
SHPRH-211ENST00000629427 GZMMP51124 257 aa10.02□□□□□ -0.8
SHPRH-211ENST00000629427 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.8
SHPRH-211ENST00000629427 CSRP2Q16527 193 aa10.02□□□□□ -0.8
SHPRH-211ENST00000629427 FAM181AQ8N9Y4 354 aa10.02□□□□□ -0.8
SHPRH-211ENST00000629427 DPH3P1Q9H4G8 78 aa10.02□□□□□ -0.8
SHPRH-211ENST00000629427 THSD7AQ9UPZ6 1657 aa10.02□□□□□ -0.8
SHPRH-211ENST00000629427 NPIPB8E9PQR5 432 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 OTX1P32242 354 aaPredicted RBP10.02□□□□□ -0.81
SHPRH-211ENST00000629427 HINT1P49773 126 aaPredicted RBP10.02□□□□□ -0.81
SHPRH-211ENST00000629427 NPIPB3Q92617 1050 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 RBM38Q9H0Z9 239 aaKnown RBP10.02□□□□□ -0.81
SHPRH-211ENST00000629427 TUBD1Q9UJT1 453 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 SPTBN1Q01082 2364 aaKnown RBP10.02□□□□□ -0.81
SHPRH-211ENST00000629427 MOSP00540 346 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 HSPB1P04792 205 aaKnown RBP10.02□□□□□ -0.81
SHPRH-211ENST00000629427 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 C2orf88Q9BSF0 95 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 IGLV1-36A0A0B4J1U3 117 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 SPSB4Q96A44 273 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM106BQ9NUM4 274 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A10PA6NDY2 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A18PA6NE21 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A16PA6NEW6 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A20PA6NIJ5 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A8PA6NJQ4 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A7PA6NKC0 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A22PA8MWA6 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A12PA8MX19 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A5PA8MXJ8 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A23PA8MXZ1 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A15PP0C7V4 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A13PP0C7W8 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A14PP0C7W9 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A24PP0C7X0 464 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 CEACAM1P13688 526 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 CLDND2Q8NHS1 167 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
SHPRH-211ENST00000629427 C10orf128Q5T292 105 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 OR4D5Q8NGN0 318 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 NEU4Q8WWR8 484 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-211ENST00000629427 HKR1P10072 659 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 OR4X2Q8NGF9 303 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 ABHD17AQ96GS6 310 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 C7orf69Q9H7B7 122 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 BEX4Q9NWD9 120 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-211ENST00000629427 CEP250Q9BV73 2442 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 C1QL1O75973 258 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 AQP3Q92482 292 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 TRBV20OR9-2A0A075B6H5 130 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 TGFAP01135 160 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 KLK2P20151 261 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 GLRXP35754 106 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM54Q969K7 222 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 MEGF10Q96KG7 1140 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 LRRK1Q38SD2 2015 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 CD1AP06126 327 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 P2RY4P51582 365 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 FUT5Q11128 374 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-211ENST00000629427 MT-ND6P03923 174 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 RPL39P5Q59GN2 51 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 SH3BGRL3Q9H299 93 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
SHPRH-211ENST00000629427 COX5BP10606 129 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 FABP2P12104 132 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms