RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MPV17LQ2QL34 196 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 NSUN5P1Q3KNT7 163 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CEACAM21Q3KPI0 293 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 SP6Q3SY56 376 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 FAM122CQ6P4D5 195 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 Q6YL49 198 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 LYZL2Q7Z4W2 148 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 FAM185AQ8N0U4 392 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 SPAG16Q8N0X2 631 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 LGI3Q8N145 548 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PNKDQ8N490 385 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 DMBX1Q8NFW5 382 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 OR5T2Q8NGG2 359 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 ERGIC1Q969X5 290 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 BSCL2Q96G97 398 aaPredicted RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 TBX15Q96SF7 602 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 Q9N2K0 584 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 OR2S2Q9NQN1 319 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 KCNIP3Q9Y2W7 256 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 NSG2Q9Y328 171 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 POMT1Q9Y6A1 747 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PLXNB1O43157 2135 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TRBV6-6A0A0A6YYG2 114 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 GLP1RP43220 463 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 AKR1C2P52895 323 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 PAX2Q02962 417 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 AKR1C1Q04828 323 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 KLRD1Q13241 179 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 HERPUD1Q15011 391 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 ABCA11PQ4W5N1 156 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 PHLDA2Q53GA4 152 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 DUX4L9Q6RFH8 374 aaPredicted RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 Q6ZSV7 163 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 ZDHHC23Q8IYP9 409 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 CCDC71LQ8N9Z2 235 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 MRAPQ8TCY5 172 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 NARS2Q96I59 477 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM56Q96MV1 263 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TP53RKQ96S44 253 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TSNAXQ99598 290 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 GINS3Q9BRX5 216 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 ADAT1Q9BUB4 502 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 PAPOLGQ9BWT3 736 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 SCRT1Q9BWW7 348 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TLNRD1Q9H1K6 362 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 RHOFQ9HBH0 211 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 WFDC1Q9HC57 220 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 ZFP57Q9NU63 452 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 UQCC1Q9NVA1 299 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 RNF7Q9UBF6 113 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 RCL1Q9Y2P8 373 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 LSM5Q9Y4Y9 91 aaKnown RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM56-RWDD3S4R434 201 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 IGHV1-69DA0A0B4J2H0 117 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 MED6O75586 246 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 OR7C1O76099 320 aaPredicted RBP3.91□□□□□ -1.78
LINC00550-201ENST00000629293 CDS2O95674 445 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 IGHV1-69P01742 117 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 GNRHRP30968 328 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 P2RY1P47900 373 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 FXYD4P59646 89 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 HERV-K104P61576 105 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 BLOC1S1P78537 153 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 SRPXP78539 464 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 IGSF11Q5DX21 431 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF880Q6PDB4 577 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 LINC00596Q86U02 117 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 FOXRED2Q8IWF2 684 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 OR52M1Q8NGK5 317 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 SLAMF9Q96A28 289 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 CCL13Q99616 98 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM222Q9H0R3 208 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 MTCH1Q9NZJ7 389 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 KIAA1456Q9P272 454 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TMED3Q9Y3Q3 217 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 IGKV1-6A0A0C4DH72 117 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TRDCB7Z8K6 153 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 DVL1O14640 695 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 MPPED1O15442 326 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 TFF1P04155 84 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 SEC11BP0C7V7 166 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 SPP1P10451 314 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 HAAOP46952 286 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 F2RL1P55085 397 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 FBXW12Q6X9E4 464 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 SLC35G3Q8N808 338 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 OR5A2Q8NGI9 324 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 OR5P3Q8WZ94 311 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 ABHD14BQ96IU4 210 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 HRH4Q9H3N8 390 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 IL36RNQ9UBH0 155 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 MMP24Q9Y5R2 645 aa3.91□□□□□ -1.78
LINC00550-201ENST00000629293 C3orf85A0A1B0GTC6 90 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 DUXBA0A1W2PPF3 345 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 MEX3AA1L020 520 aaKnown RBP3.9□□□□□ -1.78
LINC00550-201ENST00000629293 CD300LBA8K4G0 201 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 C9JQL5 133 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 NPIPB11E5RHQ5 1161 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms