RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR10X1Q8NGY0 326 aa10.05□□□□□ -0.8
PNKP-217ENST00000625216 DDB2Q92466 427 aa10.05□□□□□ -0.8
PNKP-217ENST00000625216 ST6GALNAC6Q969X2 333 aa10.05□□□□□ -0.8
PNKP-217ENST00000625216 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
PNKP-217ENST00000625216 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
PNKP-217ENST00000625216 ZNF436Q9C0F3 470 aaPredicted RBP10.05□□□□□ -0.8
PNKP-217ENST00000625216 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
PNKP-217ENST00000625216 G3V3Q6 166 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 SMLR1H3BR10 107 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 RAMP3O60896 148 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 B3GALNT1O75752 331 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 OR2A4O95047 310 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 S1PR2O95136 353 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 CDS2O95674 445 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 GIPP09681 153 aaPredicted RBP10.04□□□□□ -0.8
PNKP-217ENST00000625216 CD28P10747 220 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 REG1BP48304 166 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 THBS3P49746 956 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 ZNF816Q0VGE8 651 aaPredicted RBP10.04□□□□□ -0.8
PNKP-217ENST00000625216 GGNBP1Q5YKI7 109 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 FAM71F2Q6NXP2 309 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 CENPVQ7Z7K6 275 aaPredicted RBP10.04□□□□□ -0.8
PNKP-217ENST00000625216 TCTE3Q8IZS6 198 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 SPAG16Q8N0X2 631 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 RBPMSQ93062 196 aaKnown RBP10.04□□□□□ -0.8
PNKP-217ENST00000625216 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
PNKP-217ENST00000625216 OR2A7Q96R45 310 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 OR4F4Q96R69 305 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 S1PR3Q99500 378 aa10.04□□□□□ -0.8
PNKP-217ENST00000625216 A0A0G2JRQ6 117 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 FAM25EA8MYX2 175 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
PNKP-217ENST00000625216 CT45A6P0DMU7 189 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 CT45A5P0DMU8 189 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 CT45A7P0DMV0 189 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 IL3RAP26951 378 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 LPAR6P43657 344 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 GSG1LQ6UXU4 331 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 OR5AU1Q8NGC0 362 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 ADTRPQ96IZ2 230 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 OR10C1Q96KK4 312 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
PNKP-217ENST00000625216 NABP2Q9BQ15 211 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 FAM212BQ9NTI7 297 aaPredicted RBP10.03□□□□□ -0.8
PNKP-217ENST00000625216 MOB4Q9Y3A3 225 aa10.03□□□□□ -0.8
PNKP-217ENST00000625216 C13orf42A0A1B0GVH6 325 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 DUXBA0A1W2PPF3 345 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 A0A1W2PPI3 338 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 C5orf51A6NDU8 294 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 FGF16O43320 207 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 FCGR3BO75015 233 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 IGKV1-5P01602 117 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 AMY1AP04745 511 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 SERPINE2P07093 398 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
PNKP-217ENST00000625216 NSUN5P1Q3KNT7 163 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 Q5BKY6 102 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 NMSQ5H8A3 153 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 TCTEX1D1Q8N7M0 179 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 R3HDM4Q96D70 268 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 SEC22AQ96IW7 307 aa10.02□□□□□ -0.81
PNKP-217ENST00000625216 TET2Q6N021 2002 aaPredicted RBP10.02□□□□□ -0.81
PNKP-217ENST00000625216 H0YJW9 148 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 RBFOX2O43251 390 aaKnown RBP eCLIP10.01□□□□□ -0.81
PNKP-217ENST00000625216 P0C879 139 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 TMEM11P17152 192 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 KIR2DS2P43631 304 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 RAP2BP61225 183 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 EBI3Q14213 229 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 HES1Q14469 280 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 TMEM95Q3KNT9 176 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 TGIF2LXQ8IUE1 241 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 FAM219AQ8IW50 185 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 PDCD10Q9BUL8 212 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 SLC35D1Q9NTN3 355 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 PRELID3BQ9Y3B1 194 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 TMED3Q9Y3Q3 217 aa10.01□□□□□ -0.81
PNKP-217ENST00000625216 TRAV14DV4A0A0A6YYC5 116 aa10□□□□□ -0.81
PNKP-217ENST00000625216 IGHV1-3A0A0C4DH29 117 aa10□□□□□ -0.81
PNKP-217ENST00000625216 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
PNKP-217ENST00000625216 TXNL1O43396 289 aa10□□□□□ -0.81
PNKP-217ENST00000625216 IFNA21P01568 189 aa10□□□□□ -0.81
PNKP-217ENST00000625216 HNRNPCP07910 306 aaKnown RBP eCLIP10□□□□□ -0.81
PNKP-217ENST00000625216 RPA2P15927 270 aa10□□□□□ -0.81
PNKP-217ENST00000625216 VDAC1P21796 283 aa10□□□□□ -0.81
PNKP-217ENST00000625216 AKR1C2P52895 323 aa10□□□□□ -0.81
PNKP-217ENST00000625216 IL15RAQ13261 267 aa10□□□□□ -0.81
PNKP-217ENST00000625216 IZUMO4Q1ZYL8 232 aa10□□□□□ -0.81
PNKP-217ENST00000625216 IAH1Q2TAA2 248 aaPredicted RBP10□□□□□ -0.81
PNKP-217ENST00000625216 C9orf152Q5JTZ5 239 aa10□□□□□ -0.81
PNKP-217ENST00000625216 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
PNKP-217ENST00000625216 MOB3BQ86TA1 216 aa10□□□□□ -0.81
PNKP-217ENST00000625216 ZBTB8BQ8NAP8 495 aaPredicted RBP10□□□□□ -0.81
PNKP-217ENST00000625216 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
PNKP-217ENST00000625216 OR5AN1Q8NGI8 311 aa10□□□□□ -0.81
PNKP-217ENST00000625216 OR2T35Q8NGX2 323 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms