RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ARAP2Q8WZ64 1704 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 TIMM23O14925 209 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 VSIG8P0DPA2 414 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF658BQ4V348 819 aaPredicted RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 SCGB3A1Q96QR1 104 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 MS4A5Q9H3V2 200 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 IZUMO1RA6ND01 250 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 H0YL77 283 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 H3BUT2 72 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 ISG15P05161 165 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 LDLRAD2Q5SZI1 272 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 NDUFA2O43678 99 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 F12P00748 615 aaPredicted RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM170AQ8WVE7 144 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 DNAJC30Q96LL9 226 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 INTS1Q8N201 2190 aaKnown RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 ABCA3Q99758 1704 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 IGLV3-16A0A075B6K0 115 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 IGHV3-43A0A0B4J1X8 118 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 FAM106CPP0CH98 169 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 IGHV3-43DP0DP04 118 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 KLK2P20151 261 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 TBR1Q16650 682 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 ADRA2AP08913 450 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 ACER2Q5QJU3 275 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 PMS2CLQ68D20 193 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 KLK13Q9UKR3 277 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 SPTY2D1-AS1A0A0U1RR47 76 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 MARCH11A6NNE9 402 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 TMPRSS2O15393 492 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 FGF12P61328 243 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 EFNB1P98172 346 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 C1orf162Q8NEQ5 155 aaPredicted RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 OR52M1Q8NGK5 317 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 NEU1Q99519 415 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 KIAA1217Q5T5P2 1943 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 ATG2BQ96BY7 2078 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 MGST3O14880 152 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 DPM2O94777 84 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 DUSP15Q9H1R2 295 aaPredicted RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 SS18L2Q9UHA2 77 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 F5P12259 2224 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 IFI6P09912 130 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 VSIG10L2P0DP72 767 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 NXPH1P58417 271 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 MBNL2Q5VZF2 373 aaKnown RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 C1QL4Q86Z23 238 aa6.18□□□□□ -1.42
COLCA1-205ENST00000620864 LILRA3Q8N6C8 439 aaPredicted RBP6.18□□□□□ -1.42
COLCA1-205ENST00000620864 LIPT2A6NK58 231 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 SYNGR3O43761 229 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF415Q09FC8 603 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF56Q15929 161 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 FAM106AQ4KMX7 169 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ATG4DQ86TL0 474 aaPredicted RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 AQP3Q92482 292 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 SNRNP200O75643 2136 aaKnown RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 A0A1B0GUL6 1792 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 A0A1W2PP11 408 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 PRKNO60260 465 aaPredicted RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 SNRPCP09234 159 aaKnown RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ORMDL2Q53FV1 153 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 DCTN5Q9BTE1 182 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM106BQ9NUM4 274 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 LOXL3P58215 753 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 HSPE1P61604 102 aaKnown RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF585BQ52M93 769 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 FAM159AQ6UWV7 190 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 MSRB3Q8IXL7 192 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ST6GALNAC2Q9UJ37 374 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 SPTA1P02549 2419 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 TRAV21A0A0B4J279 112 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM238C9JI98 176 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 CLDND2Q8NHS1 167 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 GPR146Q96CH1 333 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF646O15015 1829 aaPredicted RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 PRB1P04280 392 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ZP4Q12836 540 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 INSL4Q14641 139 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 MMDQ15546 238 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ATP5L2Q7Z4Y8 100 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 C14orf144Q96I85 54 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF479Q96JC4 524 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 GNB1LQ9BYB4 327 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 GPX1P07203 203 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 KIAA0040Q15053 153 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM86BQ8N661 226 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 NPFFR1Q9GZQ6 430 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 GTSF1LQ9H1H1 148 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 AURKAIP1Q9NWT8 199 aaPredicted RBP6.17□□□□□ -1.42
COLCA1-205ENST00000620864 FOCADQ5VW36 1801 aa6.17□□□□□ -1.42
COLCA1-205ENST00000620864 APOHP02749 345 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms