RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 BMP5P22003 454 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 CDKN1AP38936 164 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 RANP62826 216 aaKnown RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 UBE2V1Q13404 147 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 WDR82Q6UXN9 313 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 ZNF497Q6ZNH5 498 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 H1FOOQ8IZA3 346 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 DIDO1Q9BTC0 2240 aaKnown RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 ADAM20O43506 726 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 IGLV2-14P01704 120 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 NKX2-1P43699 371 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 TMPRSS3P57727 454 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 RPL23P62829 140 aaKnown RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 AESQ08117 197 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 FAM27E3Q08E93 113 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 PRR30Q53SZ7 412 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 SLC24A4Q8NFF2 622 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
PCDHGA9-202ENST00000616887 PGLYRP1O75594 196 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 ZNF146Q15072 292 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 TESK1Q15569 626 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 C1orf185Q5T7R7 199 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 OR8G2PQ6IF36 304 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 ZNF695Q8IW36 515 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 ODF3L1Q8IXM7 274 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 SELENOHQ8IZQ5 122 aaKnown RBP9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 CISD2Q8N5K1 135 aaKnown RBP9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 C11orf1Q9H5F2 150 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 PPP1R3CQ9UQK1 317 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 OR2W1Q9Y3N9 320 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 TRAPPC1Q9Y5R8 145 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 TRAV1-1A0A0B4J248 108 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 A0A1W2PN81 502 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 EGR1P18146 543 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 CHRNA7P36544 502 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 TAS2R30P59541 319 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 SRSF7Q16629 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 OR5T1Q8NG75 326 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 OR2Z1Q8NG97 314 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 MRGPRDQ8TDS7 321 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 MANBALQ9NQG1 85 aa9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 LYRM2Q9NU23 88 aaPredicted RBP9.52□□□□□ -0.89
PCDHGA9-202ENST00000616887 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 PSG2P11465 335 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 KRTCAP3Q53RY4 240 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 TMEM41BQ5BJD5 291 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 ZNF709Q8N972 641 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 OR1L1Q8NH94 360 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 HSPB9Q9BQS6 159 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 DCTN5Q9BTE1 182 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 HES4Q9HCC6 221 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 NBASA2RRP1 2371 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 SH2D1BO14796 132 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 TMEM50AO95807 157 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 Q8IYB0 196 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 COQ2Q96H96 371 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 IMMP2LQ96T52 175 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 P2RX4Q99571 388 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 RSG1Q9BU20 258 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 PATZ1Q9HBE1 687 aaKnown RBP9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 TAAR3PQ9P1P4 343 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 KCNS2Q9ULS6 477 aa9.51□□□□□ -0.89
PCDHGA9-202ENST00000616887 ATRXP46100 2492 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 CDS2O95674 445 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 KITLGP21583 273 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 SSTR5P35346 364 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 TBR1Q16650 682 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 ZNF718Q3SXZ3 478 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 FAM201AQ5SY85 155 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 UNQ5815/PRO19632Q6UWF5 114 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 ACP7Q6ZNF0 438 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 Q8NA96 180 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 PLPPR2Q96GM1 343 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 TMEM56Q96MV1 263 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 CXXC4Q9H2H0 198 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 TMEM56-RWDD3S4R434 201 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 IGHV3OR15-7A0A075B7D8 119 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 IGHV3-43A0A0B4J1X8 118 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 TRAV34A0A0B4J273 112 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 ZNF320A2RRD8 509 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 IGKV1-39P01597 117 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 IGKV1D-39P04432 117 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 CTXN2P0C2S0 81 aa9.5□□□□□ -0.89
PCDHGA9-202ENST00000616887 IGHV3-43DP0DP04 118 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms