RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RNASE7Q9H1E1 156 aaKnown RBP11.04□□□□□ -0.64
MSH6-214ENST00000616033 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
MSH6-214ENST00000616033 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 WNT9BO14905 357 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 WNT2P09544 360 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 STPG3Q8N7X2 389 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 LRFN3Q9BTN0 628 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
MSH6-214ENST00000616033 PSG11Q9UQ72 335 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 C17orf112F2Z3M2 114 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 CIDEAO60543 219 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 TIMP3P35625 211 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 TMEM14EPQ6UXP3 125 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
MSH6-214ENST00000616033 RCHY1Q96PM5 261 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 FZR1Q9UM11 496 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 LRRC30A6NM36 301 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 GJE1A6NN92 205 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 FOXH1O75593 365 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 QTRT1Q9BXR0 403 aaKnown RBP11.03□□□□□ -0.64
MSH6-214ENST00000616033 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 KCNIP1Q9NZI2 227 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 IGLV3-12A0A075B6K2 115 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 FBLL1A6NHQ2 334 aaKnown RBP11.03□□□□□ -0.64
MSH6-214ENST00000616033 CD1BP29016 333 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 ALKBH6Q3KRA9 238 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
MSH6-214ENST00000616033 HES7Q9BYE0 225 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 CHRNA10Q9GZZ6 450 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 SIT1Q9Y3P8 196 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 WIPI2Q9Y4P8 454 aa11.03□□□□□ -0.64
MSH6-214ENST00000616033 LOC400499M0QZD8 3231 aa11.02□□□□□ -0.64
MSH6-214ENST00000616033 RRHO14718 337 aa11.02□□□□□ -0.64
MSH6-214ENST00000616033 FCGR3BO75015 233 aa11.02□□□□□ -0.64
MSH6-214ENST00000616033 LINC00310P59036 64 aa11.02□□□□□ -0.64
MSH6-214ENST00000616033 LCN2P80188 198 aa11.02□□□□□ -0.64
MSH6-214ENST00000616033 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.64
MSH6-214ENST00000616033 SRIP30626 198 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 SSTR5P35346 364 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 GNG3P63215 75 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 Q56UQ5 140 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 OR4P4Q8NGL7 312 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 CLCF1Q9UBD9 225 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 PATE3B3GLJ2 98 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 M0R296 226 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
MSH6-214ENST00000616033 PRRX1P54821 245 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 GGNQ86UU5 652 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 SH3BGRL2Q9UJC5 107 aa11.02□□□□□ -0.65
MSH6-214ENST00000616033 PINLYPA6NC86 204 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 SNAI2O43623 268 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 CRYABP02511 175 aaKnown RBP11.01□□□□□ -0.65
MSH6-214ENST00000616033 OR10J4P0C629 311 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 HCFC1P51610 2035 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 OCIAD2Q56VL3 154 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 PRAMEF5Q5TYX0 476 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 PRAMEF6Q5VXH4 476 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 YTHDF2Q9Y5A9 579 aaKnown RBP11.01□□□□□ -0.65
MSH6-214ENST00000616033 VENTXO95231 258 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 TYMSP04818 313 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 PRB4P10163 310 aaPredicted RBP11.01□□□□□ -0.65
MSH6-214ENST00000616033 GATA2P23769 480 aaPredicted RBP11.01□□□□□ -0.65
MSH6-214ENST00000616033 RANP62826 216 aaKnown RBP11.01□□□□□ -0.65
MSH6-214ENST00000616033 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 SPTBN2O15020 2390 aa11.01□□□□□ -0.65
MSH6-214ENST00000616033 PDE6DO43924 150 aa11□□□□□ -0.65
MSH6-214ENST00000616033 PSG7Q13046 419 aa11□□□□□ -0.65
MSH6-214ENST00000616033 AMMECR1LQ6DCA0 310 aa11□□□□□ -0.65
MSH6-214ENST00000616033 Q6ZSR3 168 aa11□□□□□ -0.65
MSH6-214ENST00000616033 GALMQ96C23 342 aa11□□□□□ -0.65
MSH6-214ENST00000616033 SEPSECSQ9HD40 501 aaKnown RBP11□□□□□ -0.65
MSH6-214ENST00000616033 ZNF391Q9UJN7 358 aa11□□□□□ -0.65
MSH6-214ENST00000616033 WASHC3Q9Y3C0 194 aa11□□□□□ -0.65
MSH6-214ENST00000616033 IGHV1-45A0A0A0MS14 117 aa11□□□□□ -0.65
MSH6-214ENST00000616033 OR2T8A6NH00 312 aa11□□□□□ -0.65
MSH6-214ENST00000616033 MT-CO3P00414 261 aa11□□□□□ -0.65
MSH6-214ENST00000616033 PQLC2Q6ZP29 291 aa11□□□□□ -0.65
MSH6-214ENST00000616033 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
MSH6-214ENST00000616033 MAFAQ8NHW3 353 aaPredicted RBP11□□□□□ -0.65
MSH6-214ENST00000616033 CSTL1Q9H114 145 aa11□□□□□ -0.65
MSH6-214ENST00000616033 BET1LQ9NYM9 111 aa11□□□□□ -0.65
MSH6-214ENST00000616033 NCKAP5O14513 1909 aa11□□□□□ -0.65
MSH6-214ENST00000616033 MED13Q9UHV7 2174 aa11□□□□□ -0.65
MSH6-214ENST00000616033 DYSFO75923 2080 aa11□□□□□ -0.65
MSH6-214ENST00000616033 K7EN84 100 aa11□□□□□ -0.65
MSH6-214ENST00000616033 CGAP01215 116 aa11□□□□□ -0.65
MSH6-214ENST00000616033 CRYBB3P26998 211 aa11□□□□□ -0.65
MSH6-214ENST00000616033 GCNT2Q8N0V5 402 aa11□□□□□ -0.65
MSH6-214ENST00000616033 FAM216AQ8WUB2 273 aa11□□□□□ -0.65
MSH6-214ENST00000616033 BORCS7Q96B45 105 aa11□□□□□ -0.65
MSH6-214ENST00000616033 OBP2BQ9NPH6 170 aa11□□□□□ -0.65
MSH6-214ENST00000616033 PSPNO60542 156 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 COX6A1P12074 109 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 PAFAH1B2P68402 229 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 CATR1Q13166 79 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms