RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	ZFP57	Q9NU63	452 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	CSPG4	Q6UVK1	2322 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	SLC25A17	O43808	307 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	SSSCA1	O60232	199 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	KBTBD11	O94819	623 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	ID3	Q02535	119 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	HNF4G	Q14541	408 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	SOX21	Q9Y651	276 aa	Predicted RBP	18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	TEX15	Q9BXT5	2789 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	C15orf61	A6NNL5	157 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	ARPC5	O15511	151 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	MOS	P00540	346 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	SLC25A4	P12235	298 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	VMA21	Q3ZAQ7	101 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	DCUN1D4	Q92564	292 aa		18.8	■□□□□ 0.6
CCND3-223	ENST00000616010	WRB	O00258	174 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	SNAPC5	O75971	98 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	RLN2	P04090	185 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	UBE2K	P61086	200 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	VSTM2A	Q8TAG5	236 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	EAF1	Q96JC9	268 aa	Predicted RBP	18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	TSNAX	Q99598	290 aa	Known RBP	18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	FAM96B	Q9Y3D0	163 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	ZFHX3	Q15911	3703 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	IL6R	P08887	468 aa	Predicted RBP	18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	BRS3	P32247	399 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	TNFRSF9	Q07011	255 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	OR2T10	Q8NGZ9	312 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	TPSG1	Q9NRR2	321 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	HSPB7	Q9UBY9	170 aa		18.79	■□□□□ 0.6
CCND3-223	ENST00000616010	FAM90A26	D6RGX4	464 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	UPK2	O00526	184 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	KCNAB3	O43448	404 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	MMD	Q15546	238 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	FAM120AOS	Q5T036	256 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	ZNF546	Q86UE3	836 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	NANP	Q8TBE9	248 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	RNF5	Q99942	180 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	LYL1	P12980	280 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	PSG5	Q15238	335 aa		18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	FOXA2	Q9Y261	457 aa	Predicted RBP	18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	TET2	Q6N021	2002 aa	Predicted RBP	18.78	■□□□□ 0.6
CCND3-223	ENST00000616010	FLNB	O75369	2602 aa	Known RBP	18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	BAHCC1	Q9P281	2608 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	HMSD	A8MTL9	139 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	FSHB	P01225	129 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	KRTAP1-1	Q07627	177 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	AARD	Q4LEZ3	155 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	SPINK9	Q5DT21	86 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	TMEM167A	Q8TBQ9	72 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	TMEM14B	Q9NUH8	114 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	NUP50	Q9UKX7	468 aa		18.77	■□□□□ 0.6
CCND3-223	ENST00000616010	SYNGR2	O43760	224 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	IFNA17	P01571	189 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	FBP1	P09467	338 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	FAM106CP	P0CH98	169 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	MYOD1	P15172	320 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	F2RL1	P55085	397 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	ZNF429	Q86V71	674 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	C9orf62	Q8N4C0	152 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	OR4A5	Q8NH83	315 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	METTL1	Q9UBP6	276 aa	Known RBP	18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	PRND	Q9UKY0	176 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	TNFSF18	Q9UNG2	199 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	TNC	P24821	2201 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	TLN2	Q9Y4G6	2542 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	CHST1	O43916	411 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	TMEM11	P17152	192 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	EBI3	Q14213	229 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	TMEM65	Q6PI78	240 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	ZDHHC16	Q969W1	377 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	MEGF9	Q9H1U4	602 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	FBXL15	Q9H469	300 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010	RBKS	Q9H477	322 aa		18.76	■□□□□ 0.59
CCND3-223	ENST00000616010		E5RGE8	158 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	NBR2	O15453	112 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	SPDEF	O95238	335 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	IAPP	P10997	89 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	PVALB	P20472	110 aa	Predicted RBP	18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	BPIFB3	P59826	476 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	RPL8	P62917	257 aa	Known RBP	18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	TEX45	Q8NA69	505 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	C22orf15	Q8WYQ4	148 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	ZNF430	Q9H8G1	570 aa	Predicted RBP	18.75	■□□□□ 0.59
CCND3-223	ENST00000616010	OR51B2	Q9Y5P1	312 aa		18.75	■□□□□ 0.59
CCND3-223	ENST00000616010		L7N2F9	121 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	CD5L	O43866	347 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	AP2S1	P53680	142 aa	Predicted RBP	18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	VAMP2	P63027	116 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	LAMTOR1	Q6IAA8	161 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010		Q8N6K4	173 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	C11orf1	Q9H5F2	150 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	SIGLEC9	Q9Y336	463 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	HSPB11	Q9Y547	144 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	ACAN	P16112	2415 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	RRH	O14718	337 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	OR2F2	O95006	317 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	CRYGB	P07316	175 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	CXCL2	P19875	107 aa		18.74	■□□□□ 0.59
CCND3-223	ENST00000616010	PJVK	Q0ZLH3	352 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms