RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SMLR1H3BR10 107 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 H3BUX3 64 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 SLC25A17O43808 307 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 PITX3O75364 302 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 OR2A4O95047 310 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 NXPH3O95157 252 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 NDUFA3O95167 84 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 MOSP00540 346 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 IGHV4-59P01825 116 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 FBP1P09467 338 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 NQO2P16083 231 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 VDAC1P21796 283 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 DYNLT3P51808 116 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 BPIFB3P59826 476 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 OR2B8PP59922 312 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 UBA52P62987 128 aaKnown RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 SSBP2P81877 361 aaPredicted RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 CD83Q01151 205 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 RELBQ01201 579 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 SRSF4Q08170 494 aaKnown RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 PJVKQ0ZLH3 352 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 PSG5Q15238 335 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 IAH1Q2TAA2 248 aaPredicted RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 LRRC75BQ2VPJ9 315 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 Q5BKY6 102 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 OR4A47Q6IF82 309 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 C12orf54Q6X4T0 127 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 RBMS3Q6XE24 437 aaKnown RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 TMEM219Q86XT9 240 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 SIGLECL1Q8N7X8 197 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 DMBX1Q8NFW5 382 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 OR4D5Q8NGN0 318 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 OR4C13Q8NGP0 309 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 FYTTD1Q96QD9 318 aaKnown RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 OR2A7Q96R45 310 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 CHIAQ9BZP6 476 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 ZNF436Q9C0F3 470 aaPredicted RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 FBXL15Q9H469 300 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 PRDM13Q9H4Q3 707 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 RANGRFQ9HD47 186 aaPredicted RBP6.4□□□□□ -1.38
PCDH9-205ENST00000614931 PLSCR3Q9NRY6 295 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 FAM96BQ9Y3D0 163 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 TMED3Q9Y3Q3 217 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 MMP24Q9Y5R2 645 aa6.4□□□□□ -1.38
PCDH9-205ENST00000614931 TRAV14DV4A0A0A6YYC5 116 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 A0A1B0GW64 132 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 C5orf51A6NDU8 294 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 SH2D7A6NKC9 451 aaPredicted RBP6.39□□□□□ -1.39
PCDH9-205ENST00000614931 CGB1A6NKQ9 187 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 HAX1O00165 279 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 UPK2O00526 184 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 FCN1O00602 326 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 CHST1O43916 411 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 KBTBD11O94819 623 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 HRASP01112 189 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 TMEM11P17152 192 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 BRS3P32247 399 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 IER3P46695 156 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 UBE2KP61086 200 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 ERVK-16P61578 105 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 HES1Q14469 280 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 LY6EQ16553 131 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 C10orf55Q5SWW7 151 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 GSG1LQ6UXU4 331 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 THNSL2Q86YJ6 484 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 Q8N9W7 124 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 NPBQ8NG41 125 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 OR2T10Q8NGZ9 312 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 RNASE11Q8TAA1 199 aaKnown RBP6.39□□□□□ -1.39
PCDH9-205ENST00000614931 TMEM167AQ8TBQ9 72 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 C2orf50Q96LR7 162 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 QTRT1Q9BXR0 403 aaKnown RBP6.39□□□□□ -1.39
PCDH9-205ENST00000614931 RANBP3Q9H6Z4 567 aaPredicted RBP6.39□□□□□ -1.39
PCDH9-205ENST00000614931 BET1LQ9NYM9 111 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 CACNG5Q9UF02 275 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 TCF19Q9Y242 345 aa6.39□□□□□ -1.39
PCDH9-205ENST00000614931 A0A1B0GU03 582 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 DNAJC9-AS1A6NH13 148 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 C15orf61A6NNL5 157 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 H0YIZ8 118 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 CLDN34H7C241 214 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 RRHO14718 337 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 NBR2O15453 112 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 ST8SIA3O43173 380 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 CCNKO75909 580 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 SPDEFO95238 335 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 IFNA21P01568 189 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
PCDH9-205ENST00000614931 AMY1AP04745 511 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 GIPP09681 153 aaPredicted RBP6.38□□□□□ -1.39
PCDH9-205ENST00000614931 HKR1P10072 659 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 SLC25A6P12236 298 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 LGALS7P47929 136 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 RAB32Q13637 225 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 SMCO1Q147U7 214 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 MMDQ15546 238 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 C5orf64Q2M2E5 130 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
PCDH9-205ENST00000614931 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms