RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 HLA-GP17693 338 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 PPP1CCP36873 323 aaKnown RBP7.4□□□□□ -1.22
PDE6A-204ENST00000613228 MPV17P39210 176 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 MRPL54Q6P161 138 aaKnown RBP7.4□□□□□ -1.22
PDE6A-204ENST00000613228 LYZL2Q7Z4W2 148 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 SGMS2Q8NHU3 365 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 LYZL4Q96KX0 146 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 ZNF355PQ9NSJ1 428 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 C1RLQ9NZP8 487 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 THYN1Q9P016 225 aa7.4□□□□□ -1.22
PDE6A-204ENST00000613228 IGHV3-43A0A0B4J1X8 118 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 IGHV2OR16-5A0A0B4J2B6 119 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 CHST1O43916 411 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 IGHV3-43DP0DP04 118 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 TRBV24-1A0A075B6N3 115 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 PINLYPA6NC86 204 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 MPDU1O75352 247 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 SMIM13P0DJ93 91 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 MBNL2Q5VZF2 373 aaKnown RBP7.4□□□□□ -1.23
PDE6A-204ENST00000613228 ACP7Q6ZNF0 438 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 TEX29Q8N6K0 151 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 OR10G4Q8NGN3 311 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 OR10G9Q8NGN4 311 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 OR10G7Q8NGN6 311 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 RFESDQ8TAC1 157 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM167BQ9NRX6 74 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 SPRR3Q9UBC9 169 aa7.4□□□□□ -1.23
PDE6A-204ENST00000613228 SCN3AQ9NY46 2000 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 PRR32B1ATL7 298 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 CLDN14O95500 239 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 IGF2-ASQ6U949 168 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 ITLN1Q8WWA0 313 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 FLYWCH2Q96CP2 140 aaKnown RBP7.39□□□□□ -1.23
PDE6A-204ENST00000613228 MRAP2Q96G30 205 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 PNRC2Q9NPJ4 139 aaKnown RBP7.39□□□□□ -1.23
PDE6A-204ENST00000613228 PLSCR4Q9NRQ2 329 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 CYSLTR1Q9Y271 337 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 MUC22E2RYF6 1773 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-204ENST00000613228 IGHV1-69-2A0A0G2JMI3 117 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 SNCGO76070 127 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 SERF2P84101 59 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 BIVMQ86UB2 503 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 ODAMA1E959 279 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 CA1P00915 261 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-204ENST00000613228 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 GFI1Q99684 422 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 HES4Q9HCC6 221 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 SOX21Q9Y651 276 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-204ENST00000613228 TRAV9-1A0A075B6T8 112 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 RAB9AP51151 201 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 RTP5Q14D33 572 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 RNF138Q8WVD3 245 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 ZNF488Q96MN9 340 aa7.39□□□□□ -1.23
PDE6A-204ENST00000613228 A0A1W2PP11 408 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 S1PR2O95136 353 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 VENTXO95231 258 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 APOBEC3AP31941 199 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-204ENST00000613228 PRSS12P56730 875 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 C2orf68Q2NKX9 166 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 NR2C2APQ86WQ0 139 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 OR10AG1Q8NH19 301 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 KCNS1Q96KK3 526 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 LIPFP07098 398 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 CXCL1P09341 107 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 SCTP09683 121 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 CECR9P0C854 216 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 RPS20P60866 119 aaKnown RBP7.38□□□□□ -1.23
PDE6A-204ENST00000613228 GNB2P62879 340 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 MEF2CQ06413 473 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-204ENST00000613228 FAM166AQ6J272 317 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 C9orf106Q8NAJ2 232 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 OR1L8Q8NGR8 309 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM204Q9BSN7 226 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 CALYQ9NYX4 217 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 CTXND1A0A1B0GTU2 59 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 KBTBD11O94819 623 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 GOSR1O95249 250 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 PSG1P11464 419 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 PCM1Q15154 2024 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 ANKRD55Q3KP44 614 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 WBP1Q96G27 269 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 SPAG17Q6Q759 2223 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 CD40P25942 277 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 G6PCP35575 357 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 RPL31P62899 125 aaKnown RBP7.38□□□□□ -1.23
PDE6A-204ENST00000613228 MRGPRFQ96AM1 343 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 C5orf30Q96GV9 206 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 TXNDC17Q9BRA2 123 aa7.38□□□□□ -1.23
PDE6A-204ENST00000613228 BARX1Q9HBU1 254 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-204ENST00000613228 MEF2BQ02080 365 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TMEM42Q69YG0 159 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 RTN4RL2Q86UN3 420 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 PRO3102Q9H379 93 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 SLC25A22Q9H936 323 aa7.37□□□□□ -1.23
PDE6A-204ENST00000613228 TECRQ9NZ01 308 aaKnown RBP7.37□□□□□ -1.23
PDE6A-204ENST00000613228 IGHV3OR15-7A0A075B7D8 119 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms