RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MRPS18BQ9Y676 258 aaKnown RBP4.27□□□□□ -1.73
VPS13D-213ENST00000613099 DOCK7Q96N67 2140 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 CCL20P78556 96 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 CCL7P80098 99 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 TMEM187Q14656 261 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 ACSM6Q6P461 480 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 VN1R2Q8NFZ6 395 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 PTH2Q96A98 100 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 CLUHP3Q96NS8 147 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 IGKV6D-21A0A0A0MT36 114 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 MEOX1P50221 254 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 RTP5Q14D33 572 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 MST1LQ2TV78 715 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 ABHD17BQ5VST6 288 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 ATP5L2Q7Z4Y8 100 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 MRGPRFQ96AM1 343 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 PAAF1Q9BRP4 392 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 PCNX1Q96RV3 2341 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 H0YIZ8 118 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 KIR2DL1P43626 348 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-213ENST00000613099 CT83Q5H943 113 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 C10orf111Q8N326 155 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 PILRBQ9UKJ0 227 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 VSIG8P0DPA2 414 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 EIF4EBP2Q13542 120 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-213ENST00000613099 FGF13Q92913 245 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 PIGTQ969N2 578 aa4.27□□□□□ -1.73
VPS13D-213ENST00000613099 LINC00615Q96LM1 132 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-213ENST00000613099 A0A087X0K7 114 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 A0A1W2PPC4 97 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 C17orf67Q0P5P2 114 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 IBA57Q5T440 356 aaKnown RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 GPR82Q96P67 336 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 A0A0A6YYD5 115 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 SYS1-DBNDD2H3BUS1 97 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF766Q5HY98 468 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 C9orf50Q5SZB4 431 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 SIGLEC8Q9NYZ4 499 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 KLF4O43474 513 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 SRFP11831 508 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 CCDC144NLQ6NUI1 221 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 RTBDNQ9BSG5 229 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 MYOFQ9NZM1 2061 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 HS3ST1O14792 307 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 COL8A1P27658 744 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 CSRP3P50461 194 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 SPACA5Q96QH8 159 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ADAMTSL4Q6UY14 1074 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 OR9G1Q8NH87 305 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 OR1L1Q8NH94 360 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 NHP2Q9NX24 153 aaKnown RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 LRRK1Q38SD2 2015 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF137PP52743 207 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 CLDN2P57739 230 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ZXDCQ2QGD7 858 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 AAMDCQ9H7C9 122 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 NGFRP08138 427 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 CKS2P33552 79 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ALKAL1Q6UXT8 129 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 OR13H1Q8NG92 308 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF502Q8TBZ5 544 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ERRFI1Q9UJM3 462 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 A0A1B0GTH9 108 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 DUX1O43812 170 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 CDKN3Q16667 212 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 AMMECR1Q9Y4X0 333 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 PROB1E7EW31 1015 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 EVI2AP22794 236 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ST8SIA1Q92185 356 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 PGLYRP4Q96LB8 373 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 FNDC10F2Z333 226 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 OR2J3O76001 311 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 KLF17Q5JT82 389 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 OR4F17Q8NGA8 305 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 SPAG8Q99932 426 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 C9JQL5 133 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 TM4SF4P48230 202 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 NANOS3P60323 173 aaKnown RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 IL11RAQ14626 422 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ADIPOQQ15848 244 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 NNATQ16517 81 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 LCN12Q6JVE5 192 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 COLCA1Q6ZS62 124 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 DRAM1Q8N682 238 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 MRAPQ8TCY5 172 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 V9GYY9 64 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 GNB2P62879 340 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
VPS13D-213ENST00000613099 SPANXB1Q9NS25 103 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-213ENST00000613099 ARHGEF17Q96PE2 2063 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-213ENST00000613099 DHRS3O75911 302 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 MOB3BQ86TA1 216 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ZNF716A6NP11 495 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 SOCS1O15524 211 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 PGFP49763 221 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 KREMEN2Q8NCW0 462 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
VPS13D-213ENST00000613099 ZFP36L2P47974 494 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms