RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 MMDQ15546 238 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 FBLN7Q53RD9 439 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 COA4Q9NYJ1 87 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 G3V3Q6 166 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 C1QBP02746 253 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 TMEM11P17152 192 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 UBE2KP61086 200 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 RELBQ01201 579 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 IL17RELQ6ZVW7 336 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 PUSL1Q8N0Z8 303 aaKnown RBP14.06□□□□□ -0.16
SREK1-216ENST00000612404 BCL6BQ8N143 479 aaPredicted RBP14.06□□□□□ -0.16
SREK1-216ENST00000612404 VSTM2AQ8TAG5 236 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 RNF5Q99942 180 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 MAGT1Q9H0U3 335 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 MEGF9Q9H1U4 602 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 BET1LQ9NYM9 111 aa14.06□□□□□ -0.16
SREK1-216ENST00000612404 NAV3Q8IVL0 2385 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 TRAV14DV4A0A0A6YYC5 116 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 ST8SIA3O43173 380 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 KBTBD11O94819 623 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 F2RL1P55085 397 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 PSG5Q15238 335 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 PPP1R14BQ96C90 147 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 SSX3Q99909 188 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 QTRT1Q9BXR0 403 aaKnown RBP14.05□□□□□ -0.16
SREK1-216ENST00000612404 PLGLAQ15195 96 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 SPNS3Q6ZMD2 512 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 THAP6Q8TBB0 222 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 TPSG1Q9NRR2 321 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 METTL1Q9UBP6 276 aaKnown RBP14.05□□□□□ -0.16
SREK1-216ENST00000612404 TNCP24821 2201 aa14.05□□□□□ -0.16
SREK1-216ENST00000612404 FXYD6-FXYD2A0A087WZ82 144 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 MDFIC2A0A1B0GVS7 189 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 C15orf61A6NNL5 157 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 NCBP2LA6PVI3 153 aaKnown RBP14.04□□□□□ -0.16
SREK1-216ENST00000612404 K7EPK0 472 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 WRBO00258 174 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 UPK2O00526 184 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 RLN2P04090 185 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 PET100P0DJ07 73 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 NKX2-5P52952 324 aaPredicted RBP14.04□□□□□ -0.16
SREK1-216ENST00000612404 POLR2GP62487 172 aaKnown RBP eCLIP14.04□□□□□ -0.16
SREK1-216ENST00000612404 EBI3Q14213 229 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 NOXA1Q86UR1 476 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 FAM71E2Q8N5Q1 922 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 TEX29Q8N6K0 151 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 OR11H4Q8NGC9 324 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 SMR3AQ99954 134 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 KIAA1456Q9P272 454 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 POMT1Q9Y6A1 747 aa14.04□□□□□ -0.16
SREK1-216ENST00000612404 NBR2O15453 112 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 SSSCA1O60232 199 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 IFNA17P01571 189 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 IL6RP08887 468 aaPredicted RBP14.03□□□□□ -0.16
SREK1-216ENST00000612404 EIF2B2P49770 351 aaKnown RBP14.03□□□□□ -0.16
SREK1-216ENST00000612404 ID3Q02535 119 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 LRRC75BQ2VPJ9 315 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 DEFB112Q30KQ8 113 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 C11orf87Q6NUJ2 197 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 THNSL2Q86YJ6 484 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 TEX45Q8NA69 505 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 OR4A5Q8NH83 315 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 FBXL15Q9H469 300 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 ZFP57Q9NU63 452 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 OR5AC2Q9NZP5 309 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 MBD2Q9UBB5 411 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 HIVEP1P15822 2718 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 H0YIZ8 118 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 RRHO14718 337 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 SRP14P37108 136 aaKnown RBP14.03□□□□□ -0.16
SREK1-216ENST00000612404 TNFRSF9Q07011 255 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 SPINK9Q5DT21 86 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 TMEM167AQ8TBQ9 72 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 CLCC1Q96S66 551 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 PRNDQ9UKY0 176 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 RCL1Q9Y2P8 373 aaKnown RBP14.03□□□□□ -0.16
SREK1-216ENST00000612404 OR51B2Q9Y5P1 312 aa14.03□□□□□ -0.16
SREK1-216ENST00000612404 DEDDO75618 318 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 SPDEFO95238 335 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 MYOD1P15172 320 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 DYNLT3P51808 116 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 RPL8P62917 257 aaKnown RBP14.02□□□□□ -0.16
SREK1-216ENST00000612404 PJVKQ0ZLH3 352 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 Q8N6K4 173 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 GRPEL2Q8TAA5 225 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 HYLS1Q96M11 299 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 RNF126Q9BV68 326 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 ZNF430Q9H8G1 570 aaPredicted RBP14.02□□□□□ -0.16
SREK1-216ENST00000612404 TMEM14BQ9NUH8 114 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 HSPB7Q9UBY9 170 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 FOXA2Q9Y261 457 aaPredicted RBP14.02□□□□□ -0.16
SREK1-216ENST00000612404 SIGLEC9Q9Y336 463 aa14.02□□□□□ -0.16
SREK1-216ENST00000612404 FAM90A26D6RGX4 464 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 H3BUX3 64 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 OPN1MWP04001 364 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 OPN1MW2P0DN77 364 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 OPN1MW3P0DN78 364 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 PRSS54Q6PEW0 395 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 C9orf139Q6ZV77 190 aa14.02□□□□□ -0.17
SREK1-216ENST00000612404 PPP1R27Q86WC6 154 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms