RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 RFX2P48378 723 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 TAS2R31P59538 309 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
CBWD3-208ENST00000612050 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 DHRS11Q6UWP2 260 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 SSX9Q7RTT3 188 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 OR51H1Q8NH63 302 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 GPX8Q8TED1 209 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 MOB3AQ96BX8 217 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 ZNF430Q9H8G1 570 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-208ENST00000612050 RABL2AQ9UBK7 228 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-208ENST00000612050 RABL2BQ9UNT1 228 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 FAM223BA6NKX1 122 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 GPR31O00270 319 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 BRI3O95415 125 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 TMBIM6P55061 237 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 RPL8P62917 257 aaKnown RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 ZNF818PQ6ZRF7 136 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 ZNF429Q86V71 674 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 FAM223AQ8IWN6 122 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 TMEM167AQ8TBQ9 72 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 FCAMRQ8WWV6 532 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 FYTTD1Q96QD9 318 aaKnown RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 OR4C12Q96R67 309 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 TINAGL1Q9GZM7 467 aaPredicted RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 NAA50Q9GZZ1 169 aaKnown RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 COMMD9Q9P000 198 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 ANAPC10Q9UM13 185 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 MEGF8Q7Z7M0 2845 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 SAP30O75446 220 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 LY86O95711 162 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 APELAP0DMC3 54 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 TBPP20226 339 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 ECI1P42126 302 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 RPL5P46777 297 aaKnown RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 ALDH3B2P48448 385 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 MRPS10P82664 201 aaKnown RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 KIAA0141Q14154 515 aaPredicted RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 RNASE10Q5GAN6 216 aaKnown RBP9.56□□□□□ -0.88
CBWD3-208ENST00000612050 VKORC1L1Q8N0U8 176 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 OR6Q1Q8NGQ2 317 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 PLEKHA2Q9HB19 425 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 BET1LQ9NYM9 111 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 SCOCQ9UIL1 159 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 ZNF257Q9Y2Q1 563 aa9.56□□□□□ -0.88
CBWD3-208ENST00000612050 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 A0A087WW49 117 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 SNAPC5O75971 98 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 RLN1P04808 185 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 DEFA4P12838 97 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 HLA-GP17693 338 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 F2RP25116 425 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 ATP5G2Q06055 141 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 EIF4EBP1Q13541 118 aaPredicted RBP9.55□□□□□ -0.88
CBWD3-208ENST00000612050 THOC7Q6I9Y2 204 aaKnown RBP9.55□□□□□ -0.88
CBWD3-208ENST00000612050 SLC38A6Q8IZM9 456 aa9.55□□□□□ -0.88
CBWD3-208ENST00000612050 PUSL1Q8N0Z8 303 aaKnown RBP9.55□□□□□ -0.88
CBWD3-208ENST00000612050 ALX4Q9H161 411 aaPredicted RBP9.55□□□□□ -0.88
CBWD3-208ENST00000612050 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
CBWD3-208ENST00000612050 ANKRD34BA5PLL1 514 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 CCDC160A6NGH7 325 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 PGAM2P15259 253 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 HIST1H1BP16401 226 aaKnown RBP9.54□□□□□ -0.88
CBWD3-208ENST00000612050 GNRHRP30968 328 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 SLURP1P55000 103 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 RPEL1Q2QD12 228 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
CBWD3-208ENST00000612050 OR4A47Q6IF82 309 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 TTC9CQ8N5M4 171 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 NECAP1Q8NC96 275 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 ADAD2Q8NCV1 583 aaKnown RBP9.54□□□□□ -0.88
CBWD3-208ENST00000612050 DGCR14Q96DF8 476 aaKnown RBP9.54□□□□□ -0.88
CBWD3-208ENST00000612050 GPHA2Q96T91 129 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 THYN1Q9P016 225 aa9.54□□□□□ -0.88
CBWD3-208ENST00000612050 PGLYRP1O75594 196 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 FGF2P09038 288 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 TAS2R19P59542 299 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 SSBP2P81877 361 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 RHOGP84095 191 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 SSBP1Q04837 148 aaKnown RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 IL18Q14116 193 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 HSD17B13Q7Z5P4 300 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 ARRDC1Q8N5I2 433 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 TSC22D3Q99576 134 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 RSRP1Q9BUV0 290 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 FKBP11Q9NYL4 201 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 CCDC59Q9P031 241 aaKnown RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 PEMTQ9UBM1 199 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-208ENST00000612050 NOTCH1P46531 2555 aa9.53□□□□□ -0.88
CBWD3-208ENST00000612050 MARCH11A6NNE9 402 aa9.52□□□□□ -0.89
CBWD3-208ENST00000612050 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
CBWD3-208ENST00000612050 GABARAPH6UMI1 98 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms