RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ZNF414Q96IQ9 312 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 C9JCJ5 164 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 NHLRC3Q5JS37 347 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 ZNF818PQ6ZRF7 136 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 THADAQ6YHU6 1953 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 A0A1W2PQM1 296 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 TNFSF10P50591 281 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 LRRK1Q38SD2 2015 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 WFDC6Q9BQY6 131 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 LHFPL6Q9Y693 200 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 PTPRDP23468 1912 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 SLC22A18ASQ8N1D0 253 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 ST6GALNAC6Q969X2 333 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 ZNF501Q96CX3 271 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-205ENST00000609104 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 HBBP68871 147 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 Q5BKY6 102 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 NABP2Q9BQ15 211 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 FAM206AQ9NX38 181 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 SCN5AQ14524 2016 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 TGFAP01135 160 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 KCNS1Q96KK3 526 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
USP6NL-205ENST00000609104 AHRRA9YTQ3 701 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
USP6NL-205ENST00000609104 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 EEF1AKMT3Q96AZ1 226 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 CENPVQ7Z7K6 275 aaPredicted RBP11.18□□□□□ -0.62
USP6NL-205ENST00000609104 NPIPB8E9PQR5 432 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 NPIPB9F8W1W9 429 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 NPIPB7O75200 414 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 MOSP00540 346 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 PCSK4Q6UW60 755 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 PARP14Q460N5 1801 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 NDUFA3O95167 84 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 PRR33A8MZF0 331 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 TMEM187Q14656 261 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 CHD3Q12873 2000 aaKnown RBP11.18□□□□□ -0.62
USP6NL-205ENST00000609104 IGHV3OR16-10A0A075B7F0 116 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 RRHO14718 337 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 NPPCP23582 126 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 ICAM4Q14773 271 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 ZNF146Q15072 292 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 FAM169BQ8N8A8 192 aa11.18□□□□□ -0.62
USP6NL-205ENST00000609104 B4E171 279 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 SNRPD3P62318 126 aaKnown RBP11.17□□□□□ -0.62
USP6NL-205ENST00000609104 WDR82Q6UXN9 313 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
USP6NL-205ENST00000609104 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 SLC25A38Q96DW6 304 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 TMEM95Q3KNT9 176 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 COX6B1P14854 86 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 AICDAQ9GZX7 198 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 GCHFRP30047 84 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 IFITM2Q01629 132 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
USP6NL-205ENST00000609104 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 TYMSP04818 313 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 FOXA3P55318 350 aaPredicted RBP11.17□□□□□ -0.62
USP6NL-205ENST00000609104 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 MBD3L1Q8WWY6 194 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 TMEM101Q96IK0 257 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
USP6NL-205ENST00000609104 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 DCTN5Q9BTE1 182 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 IGHV3-49A0A0A0MS15 119 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 M0R381 172 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 APOMO95445 188 aa11.17□□□□□ -0.62
USP6NL-205ENST00000609104 P2RY6Q15077 328 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 ACSF3Q4G176 576 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-205ENST00000609104 ERGP11308 486 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 FUT5Q11128 374 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 TSPOP30536 169 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 PTGDSP41222 190 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 CRYBA2P53672 197 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 IGLV1-36A0A0B4J1U3 117 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 SLC17A3O00476 420 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 TRBV5-7A0A0A0MS05 114 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 SFTPCP11686 197 aa11.16□□□□□ -0.62
USP6NL-205ENST00000609104 PRSS53Q2L4Q9 553 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms