RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 IZUMO4Q1ZYL8 232 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZNF672Q499Z4 452 aaPredicted RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 MRPL55Q7Z7F7 128 aaKnown RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 MMD2Q8IY49 270 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 ZFP62Q8NB50 900 aaPredicted RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 PIFOQ8TCI5 191 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 SLC25A21Q9BQT8 299 aaPredicted RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 PARLQ9H300 379 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 Q9H8V8 135 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 SDR39U1Q9NRG7 319 aaPredicted RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 HEBP2Q9Y5Z4 205 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 A0A1W2PP11 408 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 NAP1L6A6NFF2 107 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 CHEK1O14757 476 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 DHRS3O75911 302 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 PLAUP00749 431 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 C1QAP02745 245 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 HIST1H1DP16402 221 aaKnown RBP4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 MARCKSL1P49006 195 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 UNC119Q13432 240 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 MPV17LQ2QL34 196 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 TMEM14EPQ6UXP3 125 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 C10orf111Q8N326 155 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 DNAJA3Q96EY1 480 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 BMFQ96LC9 184 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 BANF2Q9H503 90 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 SLAMF8Q9P0V8 285 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 SPCS1Q9Y6A9 102 aa4.78□□□□□ -1.64
COL4A3BP-207ENST00000604926 CDC42EP2O14613 210 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 NDUFB4O95168 129 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 IGHMP01871 453 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 IGFBP6P24592 240 aaPredicted RBP4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 PFN2P35080 140 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 OPRM1P35372 400 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 GLIPR1P48060 266 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 APOC4P55056 127 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 TAS2R46P59540 309 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 PNRC1Q12796 327 aaPredicted RBP4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 ZNF718Q3SXZ3 478 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 FHL5Q5TD97 284 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 C19orf48Q6RUI8 117 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 PARM1Q6UWI2 310 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 SMIM5Q71RC9 77 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 SSX8Q7RTT4 187 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 C9orf40Q8IXQ3 194 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 ZIC4Q8N9L1 334 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 VSTM2AQ8TAG5 236 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 EEF1AKMT3Q96AZ1 226 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 GNB1LQ9BYB4 327 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 OR10A2Q9H208 303 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 ST20Q9HBF5 79 aa4.78□□□□□ -1.65
COL4A3BP-207ENST00000604926 TNRC6BQ9UPQ9 1833 aaKnown RBP4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 OVOL1O14753 267 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 NPIPB7O75200 414 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 MT-ND6P03923 174 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 SLC25A4P12235 298 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 LIFP15018 202 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 MDKP21741 143 aaPredicted RBP4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 P2RX1P51575 399 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 GNB2P62879 340 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 SGPP2Q8IWX5 399 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 OR10AG1Q8NH19 301 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 ZNF670Q9BS34 389 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 AGMATQ9BSE5 352 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 TMEM147Q9BVK8 224 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 MRPL32Q9BYC8 188 aaKnown RBP4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 ETV2O00321 342 aaPredicted RBP4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 CRXO43186 299 aaPredicted RBP4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 CSRP3P50461 194 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 ZNF345Q14585 488 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 CEACAM19Q7Z692 300 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 LRTM2Q8N967 370 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 OR4K13Q8NH42 304 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 SSBP3Q9BWW4 388 aaPredicted RBP4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 NDUFB11Q9NX14 153 aa4.77□□□□□ -1.65
COL4A3BP-207ENST00000604926 ARRDC5A6NEK1 342 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 PSPNO60542 156 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 POLR2JP52435 117 aaKnown RBP4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 RND3P61587 244 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 SP4Q02446 784 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 RSPO4Q2I0M5 234 aaPredicted RBP4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 LYPD4Q6UWN0 246 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 C10orf126Q8N4M7 172 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 OR4K17Q8NGC6 315 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 OR4C16Q8NGL9 310 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 KCTD12Q96CX2 325 aaKnown RBP4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 ZNF835Q9Y2P0 537 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 NCBP2LA6PVI3 153 aaKnown RBP4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 H3BUT2 72 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 M0R1B8 84 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 NMUP48645 174 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 INSL3P51460 131 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 ANKRD37Q7Z713 158 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 SPACA5Q96QH8 159 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 GPR21Q99679 349 aa4.76□□□□□ -1.65
COL4A3BP-207ENST00000604926 KLK5Q9Y337 293 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms