RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SCAMP5Q8TAC9 235 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 RASL10AQ92737 203 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 UBE2E3Q969T4 207 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 ST6GALNAC6Q969X2 333 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 COQ2Q96H96 371 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 KXD1Q9BQD3 176 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 ARL2-SNX15V9GYD0 113 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 E9PLD3 99 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 C11orf98E9PRG8 122 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 SLC25A5P05141 298 aaKnown RBP7.42□□□□□ -1.22
COMMD3-215ENST00000602574 MYOD1P15172 320 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 CST5P28325 142 aaPredicted RBP7.42□□□□□ -1.22
COMMD3-215ENST00000602574 BLVRBP30043 206 aaPredicted RBP7.42□□□□□ -1.22
COMMD3-215ENST00000602574 PEBP1P30086 187 aaKnown RBP7.42□□□□□ -1.22
COMMD3-215ENST00000602574 RPS15AP62244 130 aaKnown RBP7.42□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF726P1Q15940 193 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 OTPQ5XKR4 325 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 SIGLEC15Q6ZMC9 328 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM136Q6ZRR5 245 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM252Q8N6L7 170 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 NUP43Q8NFH3 380 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 OVCA2Q8WZ82 227 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 C18orf12Q96KH6 178 aa7.42□□□□□ -1.22
COMMD3-215ENST00000602574 YTHDF2Q9Y5A9 579 aaKnown RBP7.42□□□□□ -1.22
COMMD3-215ENST00000602574 ANGPTL7O43827 346 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 MYF5P13349 255 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 IGFBP3P17936 291 aaPredicted RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 DAP3P51398 398 aaKnown RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF90Q03938 601 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 CR1LQ2VPA4 569 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 PARM1Q6UWI2 310 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 FAM159AQ6UWV7 190 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF841Q6ZN19 808 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF695Q8IW36 515 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 RNF138Q8WVD3 245 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 BADQ92934 168 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 Q96M85 177 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 PRELID3AQ96N28 172 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ATG10Q9H0Y0 220 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 PELI2Q9HAT8 420 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ANAPC1Q9H1A4 1944 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 HSBP1O75506 76 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 OR2H2O95918 312 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 LINC00694P0DN24 101 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 FCGR2BP31994 310 aaPredicted RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ASIPP42127 132 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 DPTQ07507 201 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 IL11RAQ14626 422 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 CEACAM16Q2WEN9 425 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 OR10J6PQ8NGY7 276 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 OR10AC1Q8NH08 325 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 LMX1AQ8TE12 382 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 HOXB13Q92826 284 aaPredicted RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF501Q96CX3 271 aaPredicted RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 SLC25A44Q96H78 314 aaPredicted RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 HSD17B10Q99714 261 aaKnown RBP7.41□□□□□ -1.22
COMMD3-215ENST00000602574 TXNDC17Q9BRA2 123 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 PRADC1Q9BSG0 188 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 KCNK15Q9H427 330 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 INSIG2Q9Y5U4 225 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 LY96Q9Y6Y9 160 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 OBSL1O75147 1896 aa7.41□□□□□ -1.22
COMMD3-215ENST00000602574 DOCK8Q8NF50 2099 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 CPSF4LA6NMK7 179 aaKnown RBP7.4□□□□□ -1.22
COMMD3-215ENST00000602574 FGF6P10767 208 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 MALP21145 153 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 COL8A1P27658 744 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 MEOX1P50221 254 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 PFN3P60673 137 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 TLE1Q04724 770 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 DLX2Q07687 328 aaPredicted RBP7.4□□□□□ -1.22
COMMD3-215ENST00000602574 EFEMP1Q12805 493 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 OR4C11Q6IEV9 310 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 RASL11AQ6T310 242 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 SH2D6Q7Z4S9 175 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF645Q8N7E2 425 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 VN1R2Q8NFZ6 395 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 OR5C1Q8NGR4 320 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 OR6K6Q8NGW6 343 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 PPDPFLQ8WWR9 84 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 RDH5Q92781 318 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 SLC35A4Q96G79 324 aa7.4□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM121BQ9BXQ6 578 aaPredicted RBP7.4□□□□□ -1.22
COMMD3-215ENST00000602574 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.4□□□□□ -1.22
COMMD3-215ENST00000602574 APCSP02743 223 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 FBXO45P0C2W1 286 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 GCSHP23434 173 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 EMP1P54849 157 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 RPL31P62899 125 aaKnown RBP7.4□□□□□ -1.23
COMMD3-215ENST00000602574 TMEM187Q14656 261 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 NUMA1Q14980 2115 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 PRSS41Q7RTY9 318 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 LYPD6Q86Y78 171 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 OR1F12Q8NHA8 337 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 CLDN23Q96B33 292 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms