RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FAM106CPP0CH98 169 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 PVALBP20472 110 aaPredicted RBP18.13■□□□□ 0.49
IRF3-228ENST00000601291 POLR2GP62487 172 aaKnown RBP eCLIP18.13■□□□□ 0.49
IRF3-228ENST00000601291 DCUN1D4Q92564 292 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 RITA1Q96K30 269 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 HSPB7Q9UBY9 170 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 NUP50Q9UKX7 468 aa18.13■□□□□ 0.49
IRF3-228ENST00000601291 RCL1Q9Y2P8 373 aaKnown RBP18.13■□□□□ 0.49
IRF3-228ENST00000601291 HMSDA8MTL9 139 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 H0YIZ8 118 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 SLC25A17O43808 307 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 MED6O75586 246 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 TNFRSF9Q07011 255 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 AARDQ4LEZ3 155 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 ZNF429Q86V71 674 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 TEX45Q8NA69 505 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 GRPEL2Q8TAA5 225 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 TMEM167AQ8TBQ9 72 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 EAF1Q96JC9 268 aaPredicted RBP18.12■□□□□ 0.49
IRF3-228ENST00000601291 RNF126Q9BV68 326 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 QTRT1Q9BXR0 403 aaKnown RBP18.12■□□□□ 0.49
IRF3-228ENST00000601291 MAGT1Q9H0U3 335 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 MEGF9Q9H1U4 602 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 OR5AC2Q9NZP5 309 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 FOXA2Q9Y261 457 aaPredicted RBP18.12■□□□□ 0.49
IRF3-228ENST00000601291 ITPR2Q14571 2701 aa18.12■□□□□ 0.49
IRF3-228ENST00000601291 TRAV3A0A0B4J244 114 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 E5RGE8 158 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 SSSCA1O60232 199 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 LYL1P12980 280 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 CD24P25063 80 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 EBI3Q14213 229 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 PSG5Q15238 335 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 MMDQ15546 238 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 TMEM65Q6PI78 240 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 ZNF546Q86UE3 836 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 THNSL2Q86YJ6 484 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 FKBP11Q9NYL4 201 aa18.11■□□□□ 0.49
IRF3-228ENST00000601291 L7N2F9 121 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 ARPC5O15511 151 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 SYNGR2O43760 224 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 CD5LO43866 347 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 FSHBP01225 129 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 IFNA17P01571 189 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 TMEM11P17152 192 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 DYNLT3P51808 116 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 VAMP2P63027 116 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 HNF4GQ14541 408 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 OR52E5Q8NH55 327 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 TMEM14BQ9NUH8 114 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 KIAA1456Q9P272 454 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 CSMD1Q96PZ7 3565 aa18.1■□□□□ 0.49
IRF3-228ENST00000601291 NBR2O15453 112 aa18.09■□□□□ 0.49
IRF3-228ENST00000601291 CNTFRP26992 372 aa18.09■□□□□ 0.49
IRF3-228ENST00000601291 NUP62P37198 522 aaPredicted RBP18.09■□□□□ 0.49
IRF3-228ENST00000601291 RPL8P62917 257 aaKnown RBP18.09■□□□□ 0.49
IRF3-228ENST00000601291 RAB40CQ96S21 281 aa18.09■□□□□ 0.49
IRF3-228ENST00000601291 METTL1Q9UBP6 276 aaKnown RBP18.09■□□□□ 0.49
IRF3-228ENST00000601291 TNFSF18Q9UNG2 199 aa18.09■□□□□ 0.49
IRF3-228ENST00000601291 CREBBPQ92793 2442 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 FGF2P09038 288 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 SPCS3P61009 180 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 PLGLAQ15195 96 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 INO80EQ8NBZ0 244 aaPredicted RBP18.08■□□□□ 0.49
IRF3-228ENST00000601291 NPBQ8NG41 125 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 ZNF257Q9Y2Q1 563 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 OR51B2Q9Y5P1 312 aa18.08■□□□□ 0.49
IRF3-228ENST00000601291 CEBPZOSA8MTT3 80 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 RRHO14718 337 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 CHST1O43916 411 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 Q8N6K4 173 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 COMMD5Q9GZQ3 224 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 RBKSQ9H477 322 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 SIGLEC9Q9Y336 463 aa18.08■□□□□ 0.48
IRF3-228ENST00000601291 CCDC168Q8NDH2 2452 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 NDUFA3O95167 84 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 CRYGBP07316 175 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 HSPE1P61604 102 aaKnown RBP18.07■□□□□ 0.48
IRF3-228ENST00000601291 LRRC75BQ2VPJ9 315 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 PDLIM3Q53GG5 364 aaPredicted RBP18.07■□□□□ 0.48
IRF3-228ENST00000601291 FAM120AOSQ5T036 256 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 MMD2Q8IY49 270 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 C9orf62Q8N4C0 152 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 OR8H1Q8NGG4 311 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 OR5B3Q8NH48 314 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 CLCC1Q96S66 551 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 MFFQ9GZY8 342 aa18.07■□□□□ 0.48
IRF3-228ENST00000601291 ZNF430Q9H8G1 570 aaPredicted RBP18.07■□□□□ 0.48
IRF3-228ENST00000601291 GPR137BO60478 399 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 P2RY1P47900 373 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 F2RL1P55085 397 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 RPL23AP62750 156 aaKnown RBP18.06■□□□□ 0.48
IRF3-228ENST00000601291 KRTAP1-1Q07627 177 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 C9orf139Q6ZV77 190 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 PPP1R27Q86WC6 154 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 DTD1Q8TEA8 209 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 CIB3Q96Q77 187 aaPredicted RBP18.06■□□□□ 0.48
IRF3-228ENST00000601291 FBXL15Q9H469 300 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 TPSG1Q9NRR2 321 aa18.06■□□□□ 0.48
IRF3-228ENST00000601291 C1RLQ9NZP8 487 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms