RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SPDEFO95238 335 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 MOSP00540 346 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 IGKV1D-33P01593 117 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 IGKV1-33P01594 117 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 HNRNPCP07910 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 NKX2-1P43699 371 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 PSG5Q15238 335 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 MRGPRG-AS1Q2M3A8 158 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 CXorf66Q5JRM2 361 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 C11orf87Q6NUJ2 197 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 OR2T10Q8NGZ9 312 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 OR4A5Q8NH83 315 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 TMEM167AQ8TBQ9 72 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 EAF1Q96JC9 268 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 ZFP57Q9NU63 452 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 NUP50Q9UKX7 468 aa11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 RCL1Q9Y2P8 373 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-211ENST00000595945 C15orf61A6NNL5 157 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 KBTBD11O94819 623 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 CNTFRP26992 372 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 BRS3P32247 399 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 PDLIM3Q53GG5 364 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 FAM120AOSQ5T036 256 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 PRSS54Q6PEW0 395 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 NPBQ8NG41 125 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 NANPQ8TBE9 248 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 HYLS1Q96M11 299 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 TMEM14BQ9NUH8 114 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
SHKBP1-211ENST00000595945 SLC25A17O43808 307 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 DEDDO75618 318 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 NDUFA3O95167 84 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 FGF2P09038 288 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 S100A10P60903 97 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 AANATQ16613 207 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 LRRC37A5PQ49AS3 106 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 TMEM65Q6PI78 240 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 OR52E5Q8NH55 327 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 VSTM2AQ8TAG5 236 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 PIFOQ8TCI5 191 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 QTRT1Q9BXR0 403 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 PLSCR3Q9NRY6 295 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 OR5AC2Q9NZP5 309 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 MBD2Q9UBB5 411 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 FOXA2Q9Y261 457 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 LSM5Q9Y4Y9 91 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-211ENST00000595945 HMSDA8MTL9 139 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 SNAPC5O75971 98 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 FBP1P09467 338 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 PET100P0DJ07 73 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 CD24P25063 80 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 F2RL1P55085 397 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 OR2B8PP59922 312 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 TNFRSF9Q07011 255 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 TUSC1Q2TAM9 212 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 TEX29Q8N6K0 151 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 THAP6Q8TBB0 222 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 MAGT1Q9H0U3 335 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 TPSG1Q9NRR2 321 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 SIGLEC9Q9Y336 463 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
SHKBP1-211ENST00000595945 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 RRHO14718 337 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 NBR2O15453 112 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 FAM106CPP0CH98 169 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 EIF2B2P49770 351 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 HSPE1P61604 102 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 HNF4GQ14541 408 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 RBKSQ9H477 322 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 PRDM13Q9H4Q3 707 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 ZNF430Q9H8G1 570 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 TNFSF18Q9UNG2 199 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 FAM96BQ9Y3D0 163 aa11.77□□□□□ -0.53
SHKBP1-211ENST00000595945 NSD1Q96L73 2696 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 E5RGE8 158 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 SYNGR2O43760 224 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 MED6O75586 246 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 NXPH3O95157 252 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 TMEM50AO95807 157 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 RLN2P04090 185 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 MYOD1P15172 320 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms