RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, human

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER3-208	ENST00000595756	SOX15	O60248	233 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	FAU	P35544	74 aa	Known RBP	13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	CHRNA7	P36544	502 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	PLGLA	Q15195	96 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	CNPY1	Q3B7I2	92 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	TMEM177	Q53S58	311 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	ZNF818P	Q6ZRF7	136 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	SLC38A6	Q8IZM9	456 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	BVES	Q8NE79	360 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	OSR1	Q8TAX0	266 aa	Predicted RBP	13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	TCTEX1D2	Q8WW35	142 aa		13.87	□□□□□ -0.19
HOMER3-208	ENST00000595756	LINC00473	A8K010	186 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	GPR31	O00270	319 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	IGKV1-16	P04430	117 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	GNRHR	P30968	328 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	CX3CL1	P78423	397 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	ZNF79	Q15937	498 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	ZNF429	Q86V71	674 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	POC5	Q8NA72	575 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	OR4S2	Q8NH73	311 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	TERB2	Q8NHR7	220 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	CD300LF	Q8TDQ1	290 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	ZNF486	Q96H40	463 aa	Predicted RBP	13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	OR5B12	Q96R08	314 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	PRRT1	Q99946	306 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	AIFM2	Q9BRQ8	373 aa		13.86	□□□□□ -0.19
HOMER3-208	ENST00000595756	OVOL1	O14753	267 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	SHOX	O15266	292 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	FCGR3B	O75015	233 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	LGALS1	P09382	135 aa	Known RBP	13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	LINC00205	P59089	165 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	LHFPL1	Q86WI0	220 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	TOMM5	Q8N4H5	51 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	HARBI1	Q96MB7	349 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	SRR	Q9GZT4	340 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	FXYD6	Q9H0Q3	95 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	PTTG2	Q9NZH5	202 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	SCP2D1	Q9UJQ7	156 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	NUBP2	Q9Y5Y2	271 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756		U3KQK5	164 aa		13.85	□□□□□ -0.19
HOMER3-208	ENST00000595756	SORL1	Q92673	2214 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	LINC01619	G3V211	115 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	EGR2	P11161	476 aa	Predicted RBP	13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	INPP1	P49441	399 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	RPL30	P62888	115 aa	Known RBP	13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	PSG5	Q15238	335 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	VMA21	Q3ZAQ7	101 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	SCGB2B2	Q4G0G5	96 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	AKIRIN2	Q53H80	203 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	AADACL3	Q5VUY0	350 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	ZFAND1	Q8TCF1	268 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	ABHD5	Q8WTS1	349 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	DCUN1D4	Q92564	292 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	RSRP1	Q9BUV0	290 aa		13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	ALX4	Q9H161	411 aa	Predicted RBP	13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	METTL1	Q9UBP6	276 aa	Known RBP	13.84	□□□□□ -0.19
HOMER3-208	ENST00000595756	FCN1	O00602	326 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	TNFSF12	O43508	249 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	PGLYRP1	O75594	196 aa	Predicted RBP	13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	CRYZL1	O95825	349 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	CA2	P00918	260 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	PGAM2	P15259	253 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	SURF2	Q15527	256 aa	Predicted RBP	13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	ZNF562	Q6V9R5	426 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	PPP1R27	Q86WC6	154 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	OR4D10	Q8NGI6	311 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	OR4C16	Q8NGL9	310 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	S100Z	Q8WXG8	99 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	TRIM63	Q969Q1	353 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	SCGB3A2	Q96PL1	93 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	SLA2	Q9H6Q3	261 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	TPSG1	Q9NRR2	321 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	SLC2A8	Q9NY64	477 aa		13.83	□□□□□ -0.2
HOMER3-208	ENST00000595756	CREBL2	O60519	120 aa	Predicted RBP	13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	SAP30	O75446	220 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	HRAS	P01112	189 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	ZNF735	P0CB33	412 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	UBE2K	P61086	200 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	TRIQK	Q629K1	86 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	UNQ5815/PRO19632	Q6UWF5	114 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	SPAG16	Q8N0X2	631 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	TEX45	Q8NA69	505 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	VSTM2A	Q8TAG5	236 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	ARPC1A	Q92747	370 aa		13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	DLX4	Q92988	240 aa	Predicted RBP	13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	FAM103A1	Q9BTL3	118 aa	Known RBP	13.82	□□□□□ -0.2
HOMER3-208	ENST00000595756	IGHV4OR15-8	A0A075B7B6	117 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756		A0A087WW49	117 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	LY86	O95711	162 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	HPRT1	P00492	218 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	CD40LG	P29965	261 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	SLURP1	P55000	103 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	RND3	P61587	244 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	KLF9	Q13886	244 aa	Predicted RBP	13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	CCDC71L	Q8N9Z2	235 aa		13.81	□□□□□ -0.2
HOMER3-208	ENST00000595756	OR51H1	Q8NH63	302 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms