RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 DAOP14920 347 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 RAB5AP20339 215 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 FAM27E3Q08E93 113 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 ARL16Q0P5N6 197 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 RAB31Q13636 194 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 POU2AF1Q16633 256 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 LTC4SQ16873 150 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 TMEM249Q2WGJ8 235 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 DOLPP1Q86YN1 238 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 C1QL4Q86Z23 238 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 CYB561D1Q8N8Q1 229 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 OR10G9Q8NGN4 311 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 OR10G7Q8NGN6 311 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 GAFA1Q96PS6 74 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 ESRP2Q9H6T0 727 aaKnown RBP8.77□□□□□ -1.01
ZNF540-208ENST00000589857 HEYLQ9NQ87 328 aaPredicted RBP8.77□□□□□ -1.01
ZNF540-208ENST00000589857 TMEM242Q9NWH2 141 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 FKBP11Q9NYL4 201 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 JKAMPQ9P055 326 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 ZNF835Q9Y2P0 537 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 MYO7BQ6PIF6 2116 aa8.77□□□□□ -1.01
ZNF540-208ENST00000589857 A0A0G2JNJ9 132 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 MEX3AA1L020 520 aaKnown RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 ZFP92A6NM28 416 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 C17orf100A8MU93 164 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 ARG1P05089 322 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 S100A8P05109 93 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 CD1BP29016 333 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 CEBPGP53567 150 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 ELLP55199 621 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 BRWD1-AS2P59051 145 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 MRPS11P82912 194 aaKnown RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 MSMPQ1L6U9 139 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 FFAR4Q5NUL3 377 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 FAM71F2Q6NXP2 309 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 WFDC8Q8IUA0 241 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 ZNRF1Q8ND25 227 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 NEIL1Q96FI4 390 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 VKORC1Q9BQB6 163 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 QTRT1Q9BXR0 403 aaKnown RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 NPCDR1Q9BY65 106 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 TMEM140Q9NV12 185 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 Q9UFV3 132 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 RPUSD1Q9UJJ7 312 aaKnown RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 FOXA2Q9Y261 457 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 WDR83OSQ9Y284 106 aa8.76□□□□□ -1.01
ZNF540-208ENST00000589857 SETD2Q9BYW2 2564 aaPredicted RBP8.76□□□□□ -1.01
ZNF540-208ENST00000589857 CCDC168Q8NDH2 2452 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ZNF407Q9C0G0 2248 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 C15orf61A6NNL5 157 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 PMS2P5A8MQ11 134 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 APOA2P02652 100 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 OR4A8P0C604 315 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ADORA2A-AS1P86434 159 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 C17orf58Q2M2W7 97 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ETV3LQ6ZN32 361 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 RPRMLQ8N4K4 120 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 NANPQ8TBE9 248 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 DDB2Q92466 427 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 RND1Q92730 232 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 RAB1CQ92928 201 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 BTF3L4Q96K17 158 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 DCTN5Q9BTE1 182 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 C20orf24Q9BUV8 137 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ZNF257Q9Y2Q1 563 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ADGRG4Q8IZF6 3080 aa8.75□□□□□ -1.01
ZNF540-208ENST00000589857 ZGRF1Q86YA3 2104 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 CNTRLQ7Z7A1 2325 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 PPIAL4EA0A075B759 164 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 A0A1W2PPH5 198 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 A0A1W2PPV4 95 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 C15orf62A8K5M9 175 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 SEC14L6B5MCN3 397 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 PPIAL4DF5H284 164 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 PDE6DO43924 150 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 CYB5R3P00387 301 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 MT-CO2P00403 227 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 TFF1P04155 84 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 S100A9P06702 114 aaKnown RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 OR9G9P0C7N8 305 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 PPIAL4FP0DN26 164 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 MDKP21741 143 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 CCKARP32238 428 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 OPRK1P41145 380 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 CDC34P49427 236 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 HSPE1P61604 102 aaKnown RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 RELBQ01201 579 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 MEF2BQ02080 365 aaPredicted RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 ADIPOQQ15848 244 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 LRRC10Q5BKY1 277 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 SLC25A48Q6ZT89 311 aaKnown RBP8.74□□□□□ -1.01
ZNF540-208ENST00000589857 C8orf31Q8N9H6 132 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 ZNF439Q8NDP4 499 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 OR13D1Q8NGV5 346 aa8.74□□□□□ -1.01
ZNF540-208ENST00000589857 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms