RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 COMMD9Q9P000 198 aa8.09□□□□□ -1.11
TPM4-209ENST00000588483 WI2-2373I1.2A0A1W2PRP0 233 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 TEX22C9J3V5 150 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 OVOL1O14753 267 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 TNFSF12O43508 249 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 ACTL6BO94805 426 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 PMP2P02689 132 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 FCER2P06734 321 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 ZNF735P0CB33 412 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 TMBIM6P55061 237 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 DGCR2P98153 550 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 DCTN2Q13561 401 aaKnown RBP8.08□□□□□ -1.12
TPM4-209ENST00000588483 VAX1Q5SQQ9 334 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 ZNF343Q6P1L6 599 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 ZNF429Q86V71 674 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 SLC25A42Q86VD7 318 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 TMEM17Q86X19 198 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 SPAG16Q8N0X2 631 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 OR5T1Q8NG75 326 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 OR6F1Q8NGZ6 308 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 C15orf40Q8WUR7 153 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 DCUN1D4Q92564 292 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 DLX4Q92988 240 aaPredicted RBP8.08□□□□□ -1.12
TPM4-209ENST00000588483 GPHA2Q96T91 129 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 PHB2Q99623 299 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
TPM4-209ENST00000588483 RANGRFQ9HD47 186 aaPredicted RBP8.08□□□□□ -1.12
TPM4-209ENST00000588483 C13orf42A0A1B0GVH6 325 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 A0A1B0GW64 132 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 NPIPB5A8MRT5 1133 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 GPR31O00270 319 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 RBMXL2O75526 392 aaKnown RBP8.07□□□□□ -1.12
TPM4-209ENST00000588483 IGHV3-11P01762 117 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 CRYGCP07315 174 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 NQO2P16083 231 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 TBPP20226 339 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 ZP3P21754 424 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 HLA-DMAP28067 261 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 RPL5P46777 297 aaKnown RBP8.07□□□□□ -1.12
TPM4-209ENST00000588483 SLURP1P55000 103 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 UCP3P55916 312 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 RPL8P62917 257 aaKnown RBP8.07□□□□□ -1.12
TPM4-209ENST00000588483 SPCS2Q15005 226 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 C10orf55Q5SWW7 151 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 LPCAT3Q6P1A2 487 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 SNX29P2Q8IUI4 249 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 SLC2A9Q9NRM0 540 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 COA4Q9NYJ1 87 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 CCDC59Q9P031 241 aaKnown RBP8.07□□□□□ -1.12
TPM4-209ENST00000588483 MTFP1Q9UDX5 166 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 ZNF257Q9Y2Q1 563 aa8.07□□□□□ -1.12
TPM4-209ENST00000588483 FAM25AB3EWG3 89 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 FAM25CB3EWG5 89 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 FAM25GB3EWG6 89 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 E7EUB6 86 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 PGLYRP1O75594 196 aaPredicted RBP8.06□□□□□ -1.12
TPM4-209ENST00000588483 HLA-GP17693 338 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 F2RP25116 425 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 RPL27AP46776 148 aaKnown RBP8.06□□□□□ -1.12
TPM4-209ENST00000588483 ZNF45Q02386 682 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 SSBP1Q04837 148 aaKnown RBP8.06□□□□□ -1.12
TPM4-209ENST00000588483 FAM209BQ5JX69 171 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 AADACL3Q5VUY0 350 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 LHFPL1Q86WI0 220 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 CLVS1Q8IUQ0 354 aaPredicted RBP8.06□□□□□ -1.12
TPM4-209ENST00000588483 CMTM1Q8IZ96 169 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 NECAP1Q8NC96 275 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 OR51H1Q8NH63 302 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 DYNC2LI1Q8TCX1 351 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 ABHD1Q96SE0 405 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 SRSF8Q9BRL6 282 aaKnown RBP8.06□□□□□ -1.12
TPM4-209ENST00000588483 RSRP1Q9BUV0 290 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 MIXL1Q9H2W2 232 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 ZNF355PQ9NSJ1 428 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 RABL2AQ9UBK7 228 aaPredicted RBP8.06□□□□□ -1.12
TPM4-209ENST00000588483 EXTL2Q9UBQ6 330 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 RABL2BQ9UNT1 228 aa8.06□□□□□ -1.12
TPM4-209ENST00000588483 CGB1A6NKQ9 187 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 MARCH11A6NNE9 402 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 UPK2O00526 184 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 MPPED1O15442 326 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 S1PR2O95136 353 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 CD74P04233 296 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 RLN1P04808 185 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 CTRB1P17538 263 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 PTBP1P26599 531 aaKnown RBP eCLIP8.05□□□□□ -1.12
TPM4-209ENST00000588483 TSPAN5P62079 268 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 MRPS10P82664 201 aaKnown RBP8.05□□□□□ -1.12
TPM4-209ENST00000588483 KLF5Q13887 457 aaPredicted RBP8.05□□□□□ -1.12
TPM4-209ENST00000588483 ZNF585BQ52M93 769 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 CTRB2Q6GPI1 263 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 THOC7Q6I9Y2 204 aaKnown RBP8.05□□□□□ -1.12
TPM4-209ENST00000588483 SLC38A6Q8IZM9 456 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 ARRDC1Q8N5I2 433 aa8.05□□□□□ -1.12
TPM4-209ENST00000588483 OR52I2Q8NH67 350 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms