RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 LINC00271P0C7V0 271 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
SEC22B-201ENST00000578049 KIAA1644Q3SXP7 199 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 PMS2CLQ68D20 193 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HEPN1Q6WQI6 88 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 TPRX1Q8N7U7 411 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF784Q8NCA9 323 aaPredicted RBP9.13□□□□□ -0.95
SEC22B-201ENST00000578049 ITLN1Q8WWA0 313 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 IZUMO1RA6ND01 250 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 GDF9O60383 454 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 IL9P15248 144 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
SEC22B-201ENST00000578049 KLF14Q8TD94 323 aaPredicted RBP9.13□□□□□ -0.95
SEC22B-201ENST00000578049 RABAC1Q9UI14 185 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 ARF6P62330 175 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 IGHV3OR15-7A0A075B7D8 119 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 A0A1W2PQM1 296 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 FAM90A9PA6NNJ1 464 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 STARD6P59095 220 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 ICAM4Q14773 271 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 PCSK4Q6UW60 755 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 RNASEH2CQ8TDP1 164 aaKnown RBP9.13□□□□□ -0.95
SEC22B-201ENST00000578049 C18orf12Q96KH6 178 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
SEC22B-201ENST00000578049 BEND2Q8NDZ0 799 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 OR4D5Q8NGN0 318 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 C1QTNF5Q9BXJ0 243 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF646O15015 1829 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 FAM90A27PA6NNH2 459 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 SLC25A17O43808 307 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 C5orf30Q96GV9 206 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 CACNA1IQ9P0X4 2223 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 A0A1W2PPE3 182 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 SYNGR3O43761 229 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 MEF2CQ06413 473 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 ABHD12Q8N2K0 398 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 LOXL4Q96JB6 756 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 SPSB2Q99619 263 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 COL5A3P25940 1745 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 PCOLCEQ15113 449 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 PEX7O00628 323 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 TSPOP30536 169 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 C1orf162Q8NEQ5 155 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 NEUROG3Q9Y4Z2 214 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 GPR6P46095 362 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 REG1BP48304 166 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 DNASE2BQ8WZ79 361 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 SLC25A28Q96A46 364 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 C16orf92Q96LL3 132 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 REPIN1Q9BWE0 567 aaKnown RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 PIKFYVEQ9Y2I7 2098 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 HIST1H1AQ02539 215 aaPredicted RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
SEC22B-201ENST00000578049 MRPS18CQ9Y3D5 142 aaKnown RBP9.12□□□□□ -0.95
SEC22B-201ENST00000578049 A0A1W2PRE2 83 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 COLCA2A8K830 154 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 CX3CL1P78423 397 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 PNKDQ8N490 385 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 GPR82Q96P67 336 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 C12orf77C9JDV5 145 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 SRSF4Q08170 494 aaKnown RBP9.11□□□□□ -0.95
SEC22B-201ENST00000578049 LINC01549A6NIU2 74 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 COX6A1P12074 109 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 GAS1P54826 345 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 C19orf54Q5BKX5 351 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 MRPL13Q9BYD1 178 aaKnown RBP9.11□□□□□ -0.95
SEC22B-201ENST00000578049 RPP21Q9H633 154 aaKnown RBP9.11□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF831Q5JPB2 1677 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 TRAV9-2A0A087WT02 112 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 H0YIZ8 118 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 MESP2Q0VG99 397 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 RTP5Q14D33 572 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 ECSCRQ19T08 205 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 OR10J3Q5JRS4 329 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 C1QL2Q7Z5L3 287 aa9.11□□□□□ -0.95
SEC22B-201ENST00000578049 FOXD3Q9UJU5 478 aaPredicted RBP9.11□□□□□ -0.95
SEC22B-201ENST00000578049 CCL8P80075 99 aa9.1□□□□□ -0.95
SEC22B-201ENST00000578049 HCP5Q6MZN7 132 aa9.1□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF826PQ6ZT77 177 aa9.1□□□□□ -0.95
SEC22B-201ENST00000578049 MAFAQ8NHW3 353 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms