RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	FAM214B	Q7L5A3	538 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	MISP3	Q96FF7	219 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	TMEM147	Q9BVK8	224 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	MALRD1	Q5VYJ5	2156 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	DSCAM	O60469	2012 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	SP9	P0CG40	484 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	CD1B	P29016	333 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	KIR2DL2	P43627	348 aa	Predicted RBP	12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR4P4	Q8NGL7	312 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	FER1L6-AS2	Q96M78	137 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	TDRG1	Q3Y452	100 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	TMEM14EP	Q6UXP3	125 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	MDS2	Q8NDY4	140 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR2T10	Q8NGZ9	312 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	ITLN1	Q8WWA0	313 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	SERTAD4	Q9NUC0	356 aa		12.29	□□□□□ -0.44
PRPF8-216	ENST00000577001	IGHV3-72	A0A0B4J1Y9	119 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	C15orf62	A8K5M9	175 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	ERVK11-1	P61568	191 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	FAM216B	Q8N7L0	139 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	PKIB	Q9C010	78 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	TRBV20OR9-2	A0A075B6H5	130 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	CTXND1	A0A1B0GTU2	59 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001		K7EM74	188 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	SPINT2	O43291	252 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	KBTBD11	O94819	623 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	CEACAM1	P13688	526 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	S100A12	P80511	92 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	ZNF664	Q8N3J9	261 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR8G5	Q8NG78	346 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	LSM10	Q969L4	123 aa	Known RBP	12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	HSD17B10	Q99714	261 aa	Known RBP	12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	ASCL2	Q99929	193 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR6C3	Q9NZP0	311 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	DOLPP1	Q86YN1	238 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	KIR3DL3	Q8N743	410 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR10W1	Q8NGF6	305 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	OR1P1	Q8NH06	330 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	MALSU1	Q96EH3	234 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	NEIL1	Q96FI4	390 aa	Predicted RBP	12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	TRAPPC1	Q9Y5R8	145 aa		12.28	□□□□□ -0.44
PRPF8-216	ENST00000577001	OOEP	A6NGQ2	149 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	REG1A	P05451	166 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	DDT	P30046	118 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	TNFSF10	P50591	281 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	FAM27E3	Q08E93	113 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	TRIP6	Q15654	476 aa	Known RBP	12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	MBD3L1	Q8WWY6	194 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	LINC00479	Q96M42	142 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	SPRY4	Q9C004	299 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	DMRT1	Q9Y5R6	373 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF292	O60281	2723 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	IGKV1D-17	A0A075B6S4	117 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	CGA	P01215	116 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	PFN1	P07737	140 aa	Known RBP	12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	MGST1	P10620	155 aa	Known RBP	12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	IL3RA	P26951	378 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	WDR31	Q8NA23	367 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	HSPB7	Q9UBY9	170 aa		12.27	□□□□□ -0.45
PRPF8-216	ENST00000577001	SS18L1	O75177	396 aa	Predicted RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	GZMB	P10144	247 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	IGFBP2	P18065	325 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	NUBP1	P53384	320 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF146	Q15072	292 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	PXMP4	Q9Y6I8	212 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	SPTBN4	Q9H254	2564 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	HIST1H1B	P16401	226 aa	Known RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	SERF2	P84101	59 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF600	Q6ZNG1	722 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	ACY3	Q96HD9	319 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	WIPI2	Q9Y4P8	454 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	PPIAL4A	Q9Y536	164 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001		A0A1W2PRD5	423 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001		A0A1W2PRF3	423 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001		A0A1W2PRM7	423 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF729	A6NN14	1252 aa	Predicted RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	COX5B	P10606	129 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	RPL29	P47914	159 aa	Known RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	SSX2	Q16385	188 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF718	Q3SXZ3	478 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	C10orf55	Q5SWW7	151 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	TMEM178A	Q8NBL3	297 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	SIRT7	Q9NRC8	400 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	MBNL3	Q9NUK0	354 aa	Known RBP	12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	TMEM140	Q9NV12	185 aa		12.26	□□□□□ -0.45
PRPF8-216	ENST00000577001	IGHV1-18	A0A0C4DH31	117 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	DUXB	A0A1W2PPF3	345 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	OR7C2	O60412	319 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	IER3	P46695	156 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	PRR27	Q6MZM9	219 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001		Q6ZS49	121 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	OCC1	Q8TAD7	63 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	TAAR6	Q96RI8	345 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	S1PR3	Q99500	378 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001		A0A087WWC5	75 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	TRAV5	A0A0B4J249	113 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	TSTD3	H0UI37	97 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms