RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GATA4P43694 442 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 ATP5G3P48201 142 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 CT45A1Q5HYN5 189 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 FAM209BQ5JX69 171 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 TMEM183AQ8IXX5 376 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 ABHD12Q8N2K0 398 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.37□□□□□ -1.23
NCBP3-204ENST00000574911 OR4S2Q8NH73 311 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 CT45A3Q8NHU0 189 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 HIST1H2BLQ99880 126 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 PCGF1Q9BSM1 259 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 GGTLC1Q9BX51 225 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 PATZ1Q9HBE1 687 aaKnown RBP7.37□□□□□ -1.23
NCBP3-204ENST00000574911 FAM215AQ9Y5M1 114 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 PXMP4Q9Y6I8 212 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 A0A1W2PPV4 95 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 ZNF729A6NN14 1252 aaPredicted RBP7.37□□□□□ -1.23
NCBP3-204ENST00000574911 C15orf61A6NNL5 157 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 PPP5D1E7EU14 171 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 TYMSP04818 313 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 STAG3L2P0CL84 134 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 STAG3L3P0CL85 134 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 FAM3BP58499 235 aaPredicted RBP7.37□□□□□ -1.23
NCBP3-204ENST00000574911 COA6Q5JTJ3 125 aaKnown RBP7.37□□□□□ -1.23
NCBP3-204ENST00000574911 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 LEAP2Q969E1 77 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 RAB9BQ9NP90 201 aa7.37□□□□□ -1.23
NCBP3-204ENST00000574911 LSM4Q9Y4Z0 139 aaKnown RBP7.37□□□□□ -1.23
NCBP3-204ENST00000574911 KBTBD11-OT1A0A1B0GTJ5 212 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 SELLP14151 372 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 CD99P14209 185 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 HIST1H1BP16401 226 aaKnown RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 THBS3P49746 956 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 UBE2G2P60604 165 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 ACTL10Q5JWF8 245 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 FAM201AQ5SY85 155 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 MIC13Q5XKP0 118 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 ALKBH2Q6NS38 261 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 IGFL3Q6UXB1 125 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 LURAP1LQ8IV03 231 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 OR2T10Q8NGZ9 312 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 SDSLQ96GA7 329 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 PACRGQ96M98 296 aaPredicted RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 PRDM13Q9H4Q3 707 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 NPVFQ9HCQ7 196 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 FOXA2Q9Y261 457 aaPredicted RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 FRYQ5TBA9 3013 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 SAA2-SAA4A0A096LPE2 208 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 SAA2P0DJI9 122 aaPredicted RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 C1orf185Q5T7R7 199 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 STUMQ69YW2 141 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 OR4A47Q6IF82 309 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 VHLLQ6RSH7 139 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 RPRMLQ8N4K4 120 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 ZNF439Q8NDP4 499 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 OR1P1Q8NH06 330 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 PFDN5Q99471 154 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 TMEM14BQ9NUH8 114 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 RNF7Q9UBF6 113 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 A0A1W2PPQ1 181 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 NDUFB4O95168 129 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 CXorf1O96002 111 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 ARL14EPLP0DKL9 152 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 PDLIM4P50479 330 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 HSPE1P61604 102 aaKnown RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 CLEC12BQ2HXU8 276 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 CST9LP1Q5W188 147 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 DUX4L9Q6RFH8 374 aaPredicted RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 TCF23Q7RTU1 214 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 CISD2Q8N5K1 135 aaKnown RBP7.36□□□□□ -1.23
NCBP3-204ENST00000574911 ACY3Q96HD9 319 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 GAFA1Q96PS6 74 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 IDI2-AS1Q9NZ38 188 aa7.36□□□□□ -1.23
NCBP3-204ENST00000574911 PCNX2A6NKB5 2137 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 KNTC1P50748 2209 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 IL6RP08887 468 aaPredicted RBP7.35□□□□□ -1.23
NCBP3-204ENST00000574911 RD3LP0DJH9 198 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 BMP5P22003 454 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 CHRNA7P36544 502 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 MRPS11P82912 194 aaKnown RBP7.35□□□□□ -1.23
NCBP3-204ENST00000574911 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 ARSJQ5FYB0 599 aaPredicted RBP7.35□□□□□ -1.23
NCBP3-204ENST00000574911 KCNIP4Q6PIL6 250 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 ADTRPQ96IZ2 230 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 DERL1Q9BUN8 251 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 LINC00574Q9H8X3 128 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 GCM1Q9NP62 436 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 NCOR1O75376 2440 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 TRGV10A0A0A0MS01 117 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 XKRY2A2RUG3 117 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 IGHV1-46P01743 117 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 NPY1RP25929 384 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 TIMP3P35625 211 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 NUBP1P53384 320 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 LCN2P80188 198 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 C9orf152Q5JTZ5 239 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 Q6ZS92 163 aa7.35□□□□□ -1.23
NCBP3-204ENST00000574911 TMEM144Q7Z5S9 345 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms