RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PPP1R27Q86WC6 154 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 MRPL41Q8IXM3 137 aaKnown RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 Q8N6K4 173 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 OR5B3Q8NH48 314 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 PPP1R1CQ8WVI7 109 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 C17orf50Q8WW18 174 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 ZDHHC16Q969W1 377 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 CIB3Q96Q77 187 aaPredicted RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 CLCC1Q96S66 551 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 CDC42EP3Q9UKI2 254 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 FOXA2Q9Y261 457 aaPredicted RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 PDZD2O15018 2839 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 ASH1LQ9NR48 2969 aaKnown RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 ABCA12Q86UK0 2595 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 C15orf61A6NNL5 157 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 MPTX1A8MV57 137 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 FGF16O43320 207 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 OR2F2O95006 317 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 C1QBP02746 253 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 CRYGBP07316 175 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
CDRT1-206ENST00000571263 PLGLAQ15195 96 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 PDLIM3Q53GG5 364 aaPredicted RBP9.55□□□□□ -0.88
CDRT1-206ENST00000571263 RBMS3Q6XE24 437 aaKnown RBP9.55□□□□□ -0.88
CDRT1-206ENST00000571263 Q6YL49 198 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 Q6ZRM9 215 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 HSD17B13Q7Z5P4 300 aaPredicted RBP9.55□□□□□ -0.88
CDRT1-206ENST00000571263 VKORC1L1Q8N0U8 176 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 HYLS1Q96M11 299 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 RBM14Q96PK6 669 aaKnown RBP9.55□□□□□ -0.88
CDRT1-206ENST00000571263 RAB40CQ96S21 281 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 TMEM14BQ9NUH8 114 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 METTL1Q9UBP6 276 aaKnown RBP9.55□□□□□ -0.88
CDRT1-206ENST00000571263 HSPB7Q9UBY9 170 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 SIGLEC9Q9Y336 463 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
CDRT1-206ENST00000571263 A0A0G2JRQ6 117 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 NCBP2LA6PVI3 153 aaKnown RBP9.54□□□□□ -0.88
CDRT1-206ENST00000571263 E5RGE8 158 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 SYNGR2O43760 224 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 SLC25A17O43808 307 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 GPR137BO60478 399 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 SCAF4O95104 1147 aaKnown RBP9.54□□□□□ -0.88
CDRT1-206ENST00000571263 MPC2O95563 127 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 LY6G6DO95868 133 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 IFNA17P01571 189 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 OR9G9P0C7N8 305 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 SLC25A4P12235 298 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 NUP62P37198 522 aaPredicted RBP9.54□□□□□ -0.88
CDRT1-206ENST00000571263 ATP5IP56385 69 aaPredicted RBP9.54□□□□□ -0.88
CDRT1-206ENST00000571263 TAS2R30P59541 319 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 RPP30P78346 268 aaKnown RBP9.54□□□□□ -0.88
CDRT1-206ENST00000571263 HNF4GQ14541 408 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 PRSS8Q16651 343 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 DEFB112Q30KQ8 113 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 C11orf87Q6NUJ2 197 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 PRSS54Q6PEW0 395 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 TMEM65Q6PI78 240 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 CLEC9AQ6UXN8 241 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 SSMEM1Q8WWF3 244 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 RASL11BQ9BPW5 248 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
CDRT1-206ENST00000571263 HIPK2Q9H2X6 1198 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 TCF19Q9Y242 345 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 NSG2Q9Y328 171 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 MOB4Q9Y3A3 225 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 OR51B2Q9Y5P1 312 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 ABCA2Q9BZC7 2435 aa9.54□□□□□ -0.88
CDRT1-206ENST00000571263 POLQO75417 2590 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDRT1-206ENST00000571263 A0A1W2PN81 502 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 A6NDX4 124 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 HMSDA8MTL9 139 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 H3BUX3 64 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 L7N2F9 121 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 SCGB1D2O95969 90 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 MBPP02686 304 aaPredicted RBP9.53□□□□□ -0.88
CDRT1-206ENST00000571263 CHRNA7P36544 502 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 IER3P46695 156 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 F2RL1P55085 397 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 VAMP2P63027 116 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 TNFRSF9Q07011 255 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 RAB32Q13637 225 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 C5orf64Q2M2E5 130 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 ZFP69Q49AA0 526 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 ZNF562Q6V9R5 426 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 PIFOQ8TCI5 191 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 RITA1Q96K30 269 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 SLC25A33Q9BSK2 321 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 PLSCR3Q9NRY6 295 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 CENPEQ02224 2701 aa9.53□□□□□ -0.88
CDRT1-206ENST00000571263 TEX50A0A1B0GTY4 177 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 CEBPZOSA8MTT3 80 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 K7EPK0 472 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms