RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 MLNRO43193 412 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 COL4A2P08572 1712 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 PMCHP20382 165 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 LMO1P25800 156 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 GNB1P62873 340 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 FOXF2Q12947 444 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 IQCJQ1A5X6 159 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 Q6ZR03 302 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 Q8NFD4 153 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 COL5A1P20908 1838 aaPredicted RBP12.79□□□□□ -0.36
USP43-202ENST00000570475 RND2P52198 227 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 ACY3Q96HD9 319 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 CD82P27701 267 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 SSTP61278 116 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 PSG5Q15238 335 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 SPATA31B1PQ5VZV4 182 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 DMRTC2Q8IXT2 367 aaPredicted RBP12.78□□□□□ -0.36
USP43-202ENST00000570475 TECTAO75443 2155 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 APELAP0DMC3 54 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 JOSD1Q15040 202 aaPredicted RBP12.78□□□□□ -0.36
USP43-202ENST00000570475 MRPL54Q6P161 138 aaKnown RBP12.78□□□□□ -0.36
USP43-202ENST00000570475 ACP7Q6ZNF0 438 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 CMTM2Q8TAZ6 248 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 PARD6AQ9NPB6 346 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 OR6C3Q9NZP0 311 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
USP43-202ENST00000570475 PLXNB1O43157 2135 aa12.77□□□□□ -0.36
USP43-202ENST00000570475 FAM90A26D6RGX4 464 aa12.77□□□□□ -0.36
USP43-202ENST00000570475 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.36
USP43-202ENST00000570475 REG1BP48304 166 aa12.77□□□□□ -0.36
USP43-202ENST00000570475 CASP6P55212 293 aa12.77□□□□□ -0.36
USP43-202ENST00000570475 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.36
USP43-202ENST00000570475 SGK494Q96LW2 274 aa12.77□□□□□ -0.36
USP43-202ENST00000570475 NAT8BQ9UHF3 227 aa12.77□□□□□ -0.36
USP43-202ENST00000570475 CECR9P0C854 216 aa12.77□□□□□ -0.37
USP43-202ENST00000570475 CRISP2P16562 243 aa12.77□□□□□ -0.37
USP43-202ENST00000570475 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
USP43-202ENST00000570475 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
USP43-202ENST00000570475 BTF3L4Q96K17 158 aa12.77□□□□□ -0.37
USP43-202ENST00000570475 TMEM140Q9NV12 185 aa12.77□□□□□ -0.37
USP43-202ENST00000570475 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 RAB29O14966 203 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 PRB4P10163 310 aaPredicted RBP12.76□□□□□ -0.37
USP43-202ENST00000570475 FOSL1P15407 271 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 DOLPP1Q86YN1 238 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 C5orf30Q96GV9 206 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 HSPB9Q9BQS6 159 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 WIPI2Q9Y4P8 454 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 NPPCP23582 126 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 ZNF146Q15072 292 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 OR8I2Q8N0Y5 310 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 SFRP2Q96HF1 295 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 MRPS18CQ9Y3D5 142 aaKnown RBP12.76□□□□□ -0.37
USP43-202ENST00000570475 MAS1LP35410 378 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 DEFB109BQ30KR1 87 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 OCC1Q8TAD7 63 aa12.76□□□□□ -0.37
USP43-202ENST00000570475 GMPPAQ96IJ6 420 aaPredicted RBP12.76□□□□□ -0.37
USP43-202ENST00000570475 SLC31A2O15432 143 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 FOXH1O75593 365 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 ACP1P24666 158 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 CGAP01215 116 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 DBX2Q6ZNG2 339 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 OR1L6Q8NGR2 347 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 OR2V2Q96R30 315 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 SEPSECSQ9HD40 501 aaKnown RBP12.75□□□□□ -0.37
USP43-202ENST00000570475 ZNRD1Q9P1U0 126 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 A0A1W2PNU3 283 aaPredicted RBP12.75□□□□□ -0.37
USP43-202ENST00000570475 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 PDE6DO43924 150 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 MT-CO2P00403 227 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 CRYBB3P26998 211 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
USP43-202ENST00000570475 ZBTB34Q8NCN2 500 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 TCF19Q9Y242 345 aa12.75□□□□□ -0.37
USP43-202ENST00000570475 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 EREGO14944 169 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 PLAUP00749 431 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 ZNF25P17030 456 aaPredicted RBP12.74□□□□□ -0.37
USP43-202ENST00000570475 NPY1RP25929 384 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
USP43-202ENST00000570475 H1FXQ92522 213 aaKnown RBP12.74□□□□□ -0.37
USP43-202ENST00000570475 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
USP43-202ENST00000570475 C21orf140B9A014 251 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 RBFOX2O43251 390 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP43-202ENST00000570475 TOX4O94842 621 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 ADMP35318 185 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 SLC35E4Q6ICL7 350 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 LHFPL4Q7Z7J7 247 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 FDCSPQ8NFU4 85 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 IER2Q9BTL4 223 aa12.74□□□□□ -0.37
USP43-202ENST00000570475 CD177Q8N6Q3 437 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms