RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139	OR10A7	Q8NGE5	316 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	PLPPR1	Q8TBJ4	325 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF431	Q8TF32	576 aa	Predicted RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	GALM	Q96C23	342 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	TOLLIP	Q9H0E2	274 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	NRN1	Q9NPD7	142 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF581	Q9P0T4	197 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	MBD2	Q9UBB5	411 aa		5.68	□□□□□ -1.5
CNOT1-222	ENST00000570139	IGKV1D-8	A0A087WSZ0	117 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	TRGV10	A0A0A0MS01	117 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139		A0A0B4J2A0	478 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	IGHV3-64D	A0A0J9YX35	117 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	hADV38S2	A0JD32	116 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	ODAM	A1E959	279 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	SDCBP	O00560	298 aa	Predicted RBP	5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	ITGB1BP1	O14713	200 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	CCNK	O75909	580 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	CYB5R3	P00387	301 aa	Predicted RBP	5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	HLA-A	P01891	365 aa	Known RBP	5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	PRB1	P04280	392 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	PRSS1	P07477	247 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	WNT2	P09544	360 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	OR4E1	P0C645	316 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF728	P0DKX0	622 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	PGAM2	P15259	253 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	IL2RG	P31785	369 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	FCGR2C	P31995	323 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	CD80	P33681	288 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	RND3	P61587	244 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	SRPX	P78539	464 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	DHODH	Q02127	395 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139		Q3ZCU0	254 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	ABCA11P	Q4W5N1	156 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	TMEM155	Q4W5P6	130 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	LRRC10	Q5BKY1	277 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	LY6G6F	Q5SQ64	297 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	TMED4	Q7Z7H5	227 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	LYG2	Q86SG7	212 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	CMTM1	Q8IZ96	169 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	NANP	Q8TBE9	248 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	MARCH1	Q8TCQ1	289 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	MAFIP	Q8WZ33	124 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	CCL17	Q92583	94 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	RAB1C	Q92928	201 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	DLX4	Q92988	240 aa	Predicted RBP	5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	LHX4	Q969G2	390 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	GAFA1	Q96PS6	74 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	PHB2	Q99623	299 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	GPR61	Q9BZJ8	451 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	MAGT1	Q9H0U3	335 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	GAL3ST2	Q9H3Q3	398 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139		Q9HAA7	133 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	PLEKHA3	Q9HB20	300 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	SHPK	Q9UHJ6	478 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	KIF25	Q9UIL4	384 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF221	Q9UK13	617 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	JPT1	Q9UK76	154 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	KCNIP3	Q9Y2W7	256 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	LINC00312	Q9Y6C7	94 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	ASH1L	Q9NR48	2969 aa	Known RBP	5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	DYSF	O75923	2080 aa		5.67	□□□□□ -1.5
CNOT1-222	ENST00000570139	RTTN	Q86VV8	2226 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	OR5H14	A6NHG9	310 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	ZNF729	A6NN14	1252 aa	Predicted RBP	5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	RNF212B	A8MTL3	300 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	C19orf84	I3L1E1	186 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	GPR31	O00270	319 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	BET1	O15155	118 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	NDUFB3	O43676	98 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	DUS4L	O95620	317 aa	Known RBP	5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	SULT1A3	P0DMM9	295 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	SULT1A4	P0DMN0	295 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	COX6B1	P14854	86 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	RCC1	P18754	421 aa	Predicted RBP	5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	ID1	P41134	155 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	EFNA4	P52798	201 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	PRRX1	P54821	245 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	TMEM33	P57088	247 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	AES	Q08117	197 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	CLEC18B	Q6UXF7	455 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	SGPP2	Q8IWX5	399 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	TCTE3	Q8IZS6	198 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	TCTEX1D1	Q8N7M0	179 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	COQ8A	Q8NI60	647 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	MITD1	Q8WV92	249 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	MRGPRF	Q96AM1	343 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	GALNT14	Q96FL9	552 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	FAM218A	Q96MZ4	157 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	SUCNR1	Q9BXA5	334 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	FXYD6	Q9H0Q3	95 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	LINC00574	Q9H8X3	128 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	TAF9B	Q9HBM6	251 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	GNG12	Q9UBI6	72 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	FLVCR2	Q9UPI3	526 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	TCF19	Q9Y242	345 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	VSIG4	Q9Y279	399 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	ADGRG4	Q8IZF6	3080 aa		5.66	□□□□□ -1.5
CNOT1-222	ENST00000570139	IGHV3OR15-7	A0A075B7D8	119 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms