RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TRBV9A0A0B4J1U6 114 aa15.58■□□□□ 0.08
CLK3-225ENST00000569063 RBMXL2O75526 392 aaKnown RBP15.58■□□□□ 0.08
CLK3-225ENST00000569063 OR5H2Q8NGV7 314 aa15.58■□□□□ 0.08
CLK3-225ENST00000569063 OR4A5Q8NH83 315 aa15.58■□□□□ 0.08
CLK3-225ENST00000569063 MOB3AQ96BX8 217 aa15.58■□□□□ 0.08
CLK3-225ENST00000569063 ZNF2Q9BSG1 426 aaPredicted RBP15.58■□□□□ 0.08
CLK3-225ENST00000569063 SCPEP1Q9HB40 452 aa15.58■□□□□ 0.08
CLK3-225ENST00000569063 PEF1Q9UBV8 284 aaKnown RBP15.58■□□□□ 0.08
CLK3-225ENST00000569063 TNCP24821 2201 aa15.58■□□□□ 0.08
CLK3-225ENST00000569063 ANKRD34BA5PLL1 514 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 FAM223BA6NKX1 122 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 TEX22C9J3V5 150 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 HPGDSO60760 199 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 HPRT1P00492 218 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 ELK1P19419 428 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 TAS2R31P59538 309 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 DEFA5Q01523 94 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 CD69Q07108 199 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 KLF5Q13887 457 aaPredicted RBP15.57■□□□□ 0.08
CLK3-225ENST00000569063 SLC25A42Q86VD7 318 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 FAM223AQ8IWN6 122 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 CD300LFQ8TDQ1 290 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 MRPS26Q9BYN8 205 aaKnown RBP15.57■□□□□ 0.08
CLK3-225ENST00000569063 BET1LQ9NYM9 111 aa15.57■□□□□ 0.08
CLK3-225ENST00000569063 IL6RP08887 468 aaPredicted RBP15.56■□□□□ 0.08
CLK3-225ENST00000569063 ZNF735P0CB33 412 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 RPL27AP46776 148 aaKnown RBP15.56■□□□□ 0.08
CLK3-225ENST00000569063 RHOGP84095 191 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 ZNF45Q02386 682 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 POU2AF1Q16633 256 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 GPR107Q5VW38 600 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 OR4A47Q6IF82 309 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 MZT2AQ6P582 158 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 SSX9Q7RTT3 188 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 OR4C12Q96R67 309 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 ELOVL1Q9BW60 279 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 AKIP1Q9NQ31 210 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 SLC2A9Q9NRM0 540 aa15.56■□□□□ 0.08
CLK3-225ENST00000569063 A0A1B0GW64 132 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 HMX3A6NHT5 357 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 NPIPB5A8MRT5 1133 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 E7EUB6 86 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 PRH1P02810 166 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 HLA-DMAP28067 261 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 HRH1P35367 487 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 ALDH3B2P48448 385 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 RPL8P62917 257 aaKnown RBP15.55■□□□□ 0.08
CLK3-225ENST00000569063 AADACL3Q5VUY0 350 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 NECAP1Q8NC96 275 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 OR6Q1Q8NGQ2 317 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 OR6F1Q8NGZ6 308 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 OR51H1Q8NH63 302 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 AP3S1Q92572 193 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 PLEKHA2Q9HB19 425 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 ZNF257Q9Y2Q1 563 aa15.55■□□□□ 0.08
CLK3-225ENST00000569063 PGLYRP1O75594 196 aaPredicted RBP15.54■□□□□ 0.08
CLK3-225ENST00000569063 FGF2P09038 288 aa15.54■□□□□ 0.08
CLK3-225ENST00000569063 NQO2P16083 231 aa15.54■□□□□ 0.08
CLK3-225ENST00000569063 ZNF182P17025 639 aaPredicted RBP15.54■□□□□ 0.08
CLK3-225ENST00000569063 HLA-GP17693 338 aa15.54■□□□□ 0.08
CLK3-225ENST00000569063 ATP5G2Q06055 141 aa15.54■□□□□ 0.08
CLK3-225ENST00000569063 SNX29P2Q8IUI4 249 aa15.54■□□□□ 0.08
CLK3-225ENST00000569063 FYTTD1Q96QD9 318 aaKnown RBP15.54■□□□□ 0.08
CLK3-225ENST00000569063 LY86O95711 162 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 TRBV12-3P01733 135 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 CRYGCP07315 174 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 SPNP16150 400 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 RCVRNP35243 200 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 CMTM1Q8IZ96 169 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 HRASLSQ9HDD0 168 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 COMMD9Q9P000 198 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 COL7A1Q02388 2944 aa15.53■□□□□ 0.08
CLK3-225ENST00000569063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.52■□□□□ 0.08
CLK3-225ENST00000569063 DPPA5A6NC42 116 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 UPK2O00526 184 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 F2RP25116 425 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 SYNJ2BPP57105 145 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 KLK9Q2XQG4 91 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 FAM209BQ5JX69 171 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 VAX1Q5SQQ9 334 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 GPR141Q7Z602 305 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 OR9G4Q8NGQ1 327 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 FXYD6Q9H0Q3 95 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 KLK9Q9UKQ9 250 aa15.52■□□□□ 0.08
CLK3-225ENST00000569063 CGB1A6NKQ9 187 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 FAM25AB3EWG3 89 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 FAM25CB3EWG5 89 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 FAM25GB3EWG6 89 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 GPR31O00270 319 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 TPPPO94811 219 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 S1PR2O95136 353 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 IGLV1-51P01701 117 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 RLN1P04808 185 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 GP9P14770 177 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 AREGP15514 252 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 PSMB6P28072 239 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 TSPAN5P62079 268 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 EXOSC2Q13868 293 aaKnown RBP15.51■□□□□ 0.07
CLK3-225ENST00000569063 TATDN3Q17R31 274 aa15.51■□□□□ 0.07
CLK3-225ENST00000569063 RPEL1Q2QD12 228 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms