RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 C1orf194Q5T5A4 169 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 SRSF12Q8WXF0 261 aaKnown RBP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZPBPQ9BS86 351 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 THYN1Q9P016 225 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 ONECUT1Q9UBC0 465 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 HIGD1AQ9Y241 93 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM189A5PLL7 270 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 TNFSF13O75888 250 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 GPR6P46095 362 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM136Q6ZRR5 245 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 SAXO1Q8IYX7 474 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 DMRTA2Q96SC8 542 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 TCFL5Q9UL49 500 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGHV3-48P01763 117 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 CRYABP02511 175 aaKnown RBP10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 DLX1P56177 255 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 SELENOTP62341 195 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 DEFB109BQ30KR1 87 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 ACSF3Q4G176 576 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF658BQ4V348 819 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM242Q9NWH2 141 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 MGST3O14880 152 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 EREGO14944 169 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 MPV17P39210 176 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 PRRX1P54821 245 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 HCP5Q6MZN7 132 aa10.55□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGKV1D-13A0A0B4J2D9 117 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGHV2-70P01814 119 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGKV1-13P0DP09 117 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 RND2P52198 227 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 HBBP68871 147 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 ID3Q02535 119 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 TM4SF20Q53R12 229 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 STPG1Q5TH74 334 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM208Q9BTX3 173 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 PKIBQ9C010 78 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 CD33P20138 364 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 MST1LQ2TV78 715 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 LHFPL1Q86WI0 220 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 CD55P08174 381 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 SOX8P57073 446 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF319Q9P2F9 582 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGHV5-10-1A0A0J9YXX1 117 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 H7C2G1 150 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 SMIM13P0DJ93 91 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 GZMBP10144 247 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 CA7P43166 264 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 C10orf128Q5T292 105 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 FAM89BQ8N5H3 189 aa10.54□□□□□ -0.72
CSPG4P13-202ENST00000567704 RIPPLY3P57055 190 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 OR4D5Q8NGN0 318 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 LEAP2Q969E1 77 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF430Q9H8G1 570 aaPredicted RBP10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 WDR54Q9H977 334 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 GREB1Q4ZG55 1949 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 A0A1W2PRS3 328 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 C7orf71A4D174 169 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 M0R3E3 92 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 GNB2P62879 340 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 PRDM14Q9GZV8 571 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 PPIAL4DF5H284 164 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 CT55Q8WUE5 264 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 RNASE7Q9H1E1 156 aaKnown RBP10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 TNFRSF19Q9NS68 423 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 TRAV17A0A0B4J275 112 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF716A6NP11 495 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 H3BUT2 72 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 LINC00614P0C842 121 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 SPANXN1Q5VSR9 72 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 UNQ5815/PRO19632Q6UWF5 114 aa10.53□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 A6NJY4 79 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 MGPP08493 103 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 RIPPLY2Q5TAB7 128 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 DERL1Q9BUN8 251 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 SRXN1Q9BYN0 137 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 INSIG2Q9Y5U4 225 aa10.52□□□□□ -0.72
CSPG4P13-202ENST00000567704 C17orf98A8MV24 154 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 UCP2P55851 309 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 SRSF4Q08170 494 aaKnown RBP10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 MBD3L1Q8WWY6 194 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 hCG_38984A0A1B0GV85 526 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 DLL1O00548 723 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 ZNF324O75467 553 aaPredicted RBP10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 INO80CQ6PI98 192 aaPredicted RBP10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 RTN4RL2Q86UN3 420 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 HILPDAQ9Y5L2 63 aa10.52□□□□□ -0.73
CSPG4P13-202ENST00000567704 DOCK4Q8N1I0 1966 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms