RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 IFI27L2Q9H2X8 130 aa10.19□□□□□ -0.78
SF3B3-206ENST00000565990 FAM212BQ9NTI7 297 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-206ENST00000565990 OR5AC2Q9NZP5 309 aa10.19□□□□□ -0.78
SF3B3-206ENST00000565990 ZNRD1Q9P1U0 126 aa10.19□□□□□ -0.78
SF3B3-206ENST00000565990 STRAPQ9Y3F4 350 aaKnown RBP10.19□□□□□ -0.78
SF3B3-206ENST00000565990 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
SF3B3-206ENST00000565990 ZNF705EA8MWA4 302 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-206ENST00000565990 H7C2Y5 167 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 RAB29O14966 203 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 GPR137BO60478 399 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 FBXO24O75426 580 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 CDS2O95674 445 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 FCGR2CP31995 323 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 CEACAM3P40198 252 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 DYNLT3P51808 116 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 ZNF816Q0VGE8 651 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-206ENST00000565990 DEFB112Q30KQ8 113 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 ABCA11PQ4W5N1 156 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 TPTE2P1Q5T6R2 138 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 BTNL8Q6UX41 500 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 LURAP1LQ8IV03 231 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 LFNGQ8NES3 379 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 OR10X1Q8NGY0 326 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 TMED6Q8WW62 240 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
SF3B3-206ENST00000565990 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 UQCC1Q9NVA1 299 aa10.18□□□□□ -0.78
SF3B3-206ENST00000565990 AMMECR1Q9Y4X0 333 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-206ENST00000565990 A0A1B0GW64 132 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 MSGN1A6NI15 193 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 F8W036 122 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 CD5P06127 495 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 HOXB5P09067 269 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 IER3P46695 156 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 DIAPH2-AS1Q14236 149 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 HABP2Q14520 560 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-206ENST00000565990 SSX2Q16385 188 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 FAM71F2Q6NXP2 309 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 ZNF833PQ6ZTB9 187 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 LYG1Q8N1E2 194 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 PIFOQ8TCI5 191 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 RTN4IP1Q8WWV3 396 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-206ENST00000565990 C22orf15Q8WYQ4 148 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 IL22RA2Q969J5 263 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 FAM96BQ9Y3D0 163 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 CUBNO60494 3623 aa10.17□□□□□ -0.78
SF3B3-206ENST00000565990 IGKV1D-13A0A0B4J2D9 117 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 FAM90A9PA6NNJ1 464 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 PPYP01298 95 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 FBP1P09467 338 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 OR8U9P0C7N5 309 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 IGKV1-13P0DP09 117 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 AADACP22760 399 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 IL3RAP26951 378 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 PIGPP57054 158 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 S100A10P60903 97 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 HERV-K104P61576 105 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 MSMO1Q15800 293 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 PUSL1Q8N0Z8 303 aaKnown RBP10.16□□□□□ -0.78
SF3B3-206ENST00000565990 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-206ENST00000565990 OR8U1Q8NH10 309 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 RNF150Q9ULK6 438 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 HILPDAQ9Y5L2 63 aa10.16□□□□□ -0.78
SF3B3-206ENST00000565990 NF1P21359 2839 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 SAA2-SAA4A0A096LPE2 208 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 MDFIC2A0A1B0GVS7 189 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 HSD17B6O14756 317 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 ST8SIA3O43173 380 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 SAA2P0DJI9 122 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-206ENST00000565990 FOLR2P14207 255 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 EIF4EBP1Q13541 118 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-206ENST00000565990 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 THNSL2Q86YJ6 484 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 CFHR4Q92496 578 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 RPEQ96AT9 228 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 S1PR3Q99500 378 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 HIPK2Q9H2X6 1198 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 TREM1Q9NP99 234 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 FBXL17Q9UF56 701 aa10.15□□□□□ -0.78
SF3B3-206ENST00000565990 IGHV1-3A0A0C4DH29 117 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 BTBD17A6NE02 478 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 CLDN34H7C241 214 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 TXNL1O43396 289 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 CT45A6P0DMU7 189 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 CT45A5P0DMU8 189 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 CT45A7P0DMV0 189 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 SLC25A6P12236 298 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 PI3P19957 117 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 PVALBP20472 110 aaPredicted RBP10.14□□□□□ -0.79
SF3B3-206ENST00000565990 GNRHRP30968 328 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 GPR12P47775 334 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 EBI3Q14213 229 aa10.14□□□□□ -0.79
SF3B3-206ENST00000565990 PEA15Q15121 130 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms