RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 THOC7Q6I9Y2 204 aaKnown RBP13.54□□□□□ -0.24
CMTM3-208ENST00000564247 GSG1LQ6UXU4 331 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 VKORC1L1Q8N0U8 176 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 CADM3Q8N126 398 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 TEX45Q8NA69 505 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 NPBQ8NG41 125 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 OR2A7Q96R45 310 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 SPIN2AQ99865 258 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 SPIN2BQ9BPZ2 258 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 MGAT4CQ9UBM8 478 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 TCF19Q9Y242 345 aa13.54□□□□□ -0.24
CMTM3-208ENST00000564247 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 NBR2O15453 112 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 SLC25A17O43808 307 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 ADAP1O75689 374 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 IGKV1-5P01602 117 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 HLA-GP17693 338 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 LY6EQ16553 131 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 OR4A47Q6IF82 309 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 C12orf54Q6X4T0 127 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 Q8N6K4 173 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 OR4A16Q8NH70 328 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 GPR146Q96CH1 333 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 RBMXL1Q96E39 390 aaKnown RBP13.53□□□□□ -0.24
CMTM3-208ENST00000564247 RBM14Q96PK6 669 aaKnown RBP13.53□□□□□ -0.24
CMTM3-208ENST00000564247 TMEM140Q9NV12 185 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
CMTM3-208ENST00000564247 METTL1Q9UBP6 276 aaKnown RBP13.53□□□□□ -0.24
CMTM3-208ENST00000564247 A0A1B0GU03 582 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 A0A1B0GVG6 124 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 A6NDX4 124 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 RRHO14718 337 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 RBMXL2O75526 392 aaKnown RBP13.52□□□□□ -0.25
CMTM3-208ENST00000564247 OR2F2O95006 317 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 IGLV2-23P01705 113 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 IGHV4-59P01825 116 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 RNASE1P07998 156 aaKnown RBP13.52□□□□□ -0.25
CMTM3-208ENST00000564247 SAA1P0DJI8 122 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-208ENST00000564247 F2RL1P55085 397 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 FCN2Q15485 313 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 NMSQ5H8A3 153 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 C16orf82Q7Z2V1 217 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 SLC25A33Q9BSK2 321 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 PDCD10Q9BUL8 212 aa13.52□□□□□ -0.25
CMTM3-208ENST00000564247 RANBP3Q9H6Z4 567 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-208ENST00000564247 UPK2O00526 184 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 CCSO14618 274 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 HOXA3O43365 443 aaPredicted RBP13.51□□□□□ -0.25
CMTM3-208ENST00000564247 SULT1A3P0DMM9 295 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 SULT1A4P0DMN0 295 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 SLC25A6P12236 298 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 CNTFRP26992 372 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 BCAP31P51572 246 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 CYCSP99999 105 aaKnown RBP13.51□□□□□ -0.25
CMTM3-208ENST00000564247 C2orf68Q2NKX9 166 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
CMTM3-208ENST00000564247 PUSL1Q8N0Z8 303 aaKnown RBP13.51□□□□□ -0.25
CMTM3-208ENST00000564247 TMEM86BQ8N661 226 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 TMEM167AQ8TBQ9 72 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 C2orf50Q96LR7 162 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 RASL11BQ9BPW5 248 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 FBXL15Q9H469 300 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.51□□□□□ -0.25
CMTM3-208ENST00000564247 FKBP11Q9NYL4 201 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 POMT1Q9Y6A1 747 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
CMTM3-208ENST00000564247 M0QZK8 103 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 ACTL6BO94805 426 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 KBTBD11O94819 623 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 NDUFA3O95167 84 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 SIX6O95475 246 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 HKR1P10072 659 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 SMCO1Q147U7 214 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 PPP1R27Q86WC6 154 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 TMEM219Q86XT9 240 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 OR5M8Q8NGP6 311 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 OR1S1Q8NH92 325 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 PLSCR3Q9NRY6 295 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 TNFRSF19Q9NS68 423 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 GSKIPQ9P0R6 139 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 CACNG5Q9UF02 275 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 CACFD1Q9UGQ2 172 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 SIGLEC9Q9Y336 463 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 MOB4Q9Y3A3 225 aa13.5□□□□□ -0.25
CMTM3-208ENST00000564247 A0A0G2JRQ6 117 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 FGF16O43320 207 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 CRYGBP07316 175 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 IL6RP08887 468 aaPredicted RBP13.49□□□□□ -0.25
CMTM3-208ENST00000564247 OR9G9P0C7N8 305 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 P0C879 139 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 IZUMO4Q1ZYL8 232 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 OR10C1Q96KK4 312 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms