RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CAPZA3Q96KX2 299 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 C20orf166-AS1Q96NR2 134 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 MGLLQ99685 303 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 Q9BRP9 147 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 GPR84Q9NQS5 396 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 MRPL27Q9P0M9 148 aaKnown RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 ANGPT4Q9Y264 503 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 CRB1P82279 1406 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 REREQ9P2R6 1566 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 ICE1Q9Y2F5 2266 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 SHANK3Q9BYB0 1731 aa0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 TRPM3Q9HCF6 1732 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P33-201ENST00000563485 MUC21A0A0G2JKD1 596 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 MUC21A0A140T8X8 626 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 SMIM9A6NGZ8 99 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 A8MUN3 132 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 C19orf84I3L1E1 186 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 BHLHE40O14503 412 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF728P0DKX0 622 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 FGF6P10767 208 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 BLVRBP30043 206 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 ALDH3A1P30838 453 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 XCL1P47992 114 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 FXYD7P58549 80 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 TAS2R30P59541 319 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 TAS2R20P59543 309 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 DEFB103AP81534 67 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 MRPS25P82663 173 aaKnown RBP0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 REEP5Q00765 189 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 PSG4Q00888 419 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 AKR1C1Q04828 323 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 PRDX4Q13162 271 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 MIAQ16674 131 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 FAM229BQ4G0N7 80 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 GLT8D1Q68CQ7 371 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR6V1Q8N148 313 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 UMODL1-AS1Q8N2C9 162 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 CNEP1R1Q8N9A8 125 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR5B17Q8NGF7 314 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR2T27Q8NH04 317 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR4K13Q8NH42 304 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR4X1Q8NH49 305 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 ANKRD7Q92527 254 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 BORCS7Q96B45 105 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 PPP1R14BQ96C90 147 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 CNBD2Q96M20 576 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 CXCL16Q9H2A7 254 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 RNF122Q9H9V4 155 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 MRPL16Q9NX20 251 aaKnown RBP0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 NYNRINQ9P2P1 1898 aaKnown RBP0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 FBXO5Q9UKT4 447 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 PRELID1Q9Y255 219 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCL26Q9Y258 94 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 COQ4Q9Y3A0 265 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 PXMP4Q9Y6I8 212 aa0.85□□□□□ -2.27
HMGB1P33-201ENST00000563485 EIF3AQ14152 1382 aaKnown RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 DOCK6Q96HP0 2047 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 A0A087WUJ7 227 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 TRGV5A0A0B4J1U4 118 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 A0A1W2PQD3 144 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 KNCNA6PVL3 124 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 INMT-MINDY4F8WBC2 141 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 LY6LH3BQJ8 138 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 PSMD12O00232 456 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 PLA2G10O15496 165 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 GNRH2O43555 120 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF73O43830 326 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 NOS1APO75052 506 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR2B3O76000 313 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 NSA2O95478 260 aaKnown RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 RPS17P08708 135 aaKnown RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 SRP19P09132 144 aaKnown RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 CBR1P16152 277 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 PSMB8P28062 276 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 HSD11B1P28845 292 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 MAP2K4P45985 399 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 CAPZBP47756 277 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 EMP1P54849 157 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 SNRPD2P62316 118 aaKnown RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 CCL20P78556 96 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 DEFA6Q01524 100 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 KIAA2026Q5HYC2 2103 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 PABPC1L2AQ5JQF8 200 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM42Q69YG0 159 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 C2orf91Q6ZV80 131 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 GLT6D1Q7Z4J2 308 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 SPATA12Q7Z6I5 190 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 C12orf45Q8N5I9 185 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF676Q8N7Q3 588 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 DAND5Q8N907 189 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR13C4Q8NGS5 318 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF675Q8TD23 568 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 RAB2BQ8WUD1 216 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 ITFG2Q969R8 447 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 DCUN1D1Q96GG9 259 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 SFRP2Q96HF1 295 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 DNAJC30Q96LL9 226 aa0.84□□□□□ -2.27
HMGB1P33-201ENST00000563485 TSPAN32Q96QS1 320 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms