RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 QTRT1Q9BXR0 403 aaKnown RBP8.15□□□□□ -1.11
SMG1-208ENST00000563448 MEGF9Q9H1U4 602 aa8.15□□□□□ -1.11
SMG1-208ENST00000563448 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.15□□□□□ -1.11
SMG1-208ENST00000563448 OR5AC2Q9NZP5 309 aa8.15□□□□□ -1.11
SMG1-208ENST00000563448 RCL1Q9Y2P8 373 aaKnown RBP8.15□□□□□ -1.11
SMG1-208ENST00000563448 POMT1Q9Y6A1 747 aa8.15□□□□□ -1.11
SMG1-208ENST00000563448 FLNAP21333 2647 aaKnown RBP8.15□□□□□ -1.11
SMG1-208ENST00000563448 MYO9AB2RTY4 2548 aa8.15□□□□□ -1.11
SMG1-208ENST00000563448 ST8SIA3O43173 380 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 MOSP00540 346 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 CRYGBP07316 175 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 SLC25A4P12235 298 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 LYL1P12980 280 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 LGALS7P47929 136 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 UBE2KP61086 200 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 POLR2GP62487 172 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMG1-208ENST00000563448 MRGPRG-AS1Q2M3A8 158 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 PRSS54Q6PEW0 395 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 Q8N6K4 173 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 OR4A16Q8NH70 328 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 GRPEL2Q8TAA5 225 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 HYLS1Q96M11 299 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 RNF5Q99942 180 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 MAGT1Q9H0U3 335 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 C11orf1Q9H5F2 150 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 MBD2Q9UBB5 411 aa8.14□□□□□ -1.11
SMG1-208ENST00000563448 C15orf61A6NNL5 157 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 SLC25A17O43808 307 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 CD5LO43866 347 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 FLNBO75369 2602 aaKnown RBP8.13□□□□□ -1.11
SMG1-208ENST00000563448 DEDDO75618 318 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 KBTBD11O94819 623 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 MYOD1P15172 320 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 BRS3P32247 399 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 F2RL1P55085 397 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 HES1Q14469 280 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 HNF4GQ14541 408 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 PSG5Q15238 335 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 AARDQ4LEZ3 155 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 BCL6BQ8N143 479 aaPredicted RBP8.13□□□□□ -1.11
SMG1-208ENST00000563448 OR2T10Q8NGZ9 312 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 THAP6Q8TBB0 222 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 NANPQ8TBE9 248 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 TMEM167AQ8TBQ9 72 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 HSPB7Q9UBY9 170 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 NUP50Q9UKX7 468 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 CELSR1Q9NYQ6 3014 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 CREBBPQ92793 2442 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 FXYD6-FXYD2A0A087WZ82 144 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 FAM90A26D6RGX4 464 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 BPIFB3P59826 476 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 VMA21Q3ZAQ7 101 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 ZNF429Q86V71 674 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 THNSL2Q86YJ6 484 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 TEX45Q8NA69 505 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 NPBQ8NG41 125 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 OR4A5Q8NH83 315 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
SMG1-208ENST00000563448 RBKSQ9H477 322 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 ZFP57Q9NU63 452 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 TMEM14BQ9NUH8 114 aa8.13□□□□□ -1.11
SMG1-208ENST00000563448 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 KCNAB3O43448 404 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 SYNGR2O43760 224 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 SSSCA1O60232 199 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 RBMXL2O75526 392 aaKnown RBP8.12□□□□□ -1.11
SMG1-208ENST00000563448 SNAPC5O75971 98 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 NDUFA3O95167 84 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 RLN2P04090 185 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 PET100P0DJ07 73 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 TMEM11P17152 192 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 DYNLT3P51808 116 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 TNFRSF9Q07011 255 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 LAMTOR1Q6IAA8 161 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 TMEM65Q6PI78 240 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 VSTM2AQ8TAG5 236 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 PIFOQ8TCI5 191 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 DCUN1D4Q92564 292 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 FBXL15Q9H469 300 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 FOXA2Q9Y261 457 aaPredicted RBP8.12□□□□□ -1.11
SMG1-208ENST00000563448 SIGLEC9Q9Y336 463 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 FAM96BQ9Y3D0 163 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 MDFIC2A0A1B0GVS7 189 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 RRHO14718 337 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 NBR2O15453 112 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 ARPC5O15511 151 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 CHST1O43916 411 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 SPDEFO95238 335 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 FBP1P09467 338 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 FAM106CPP0CH98 169 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 CXCL2P19875 107 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 PAX9P55771 341 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 PJVKQ0ZLH3 352 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 MMDQ15546 238 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 LGALSLQ3ZCW2 172 aaPredicted RBP8.12□□□□□ -1.11
SMG1-208ENST00000563448 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 C9orf139Q6ZV77 190 aa8.12□□□□□ -1.11
SMG1-208ENST00000563448 ZNF546Q86UE3 836 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms