RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MXD1Q05195 221 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 BEST4Q8NFU0 473 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 SLC2A9Q9NRM0 540 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 DMRT1Q9Y5R6 373 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 TRAV18A0A075B6X5 111 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 A0A1B0GW64 132 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 CLEC2LP0C7M8 214 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 MAS1LP35410 378 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 RPL27AP46776 148 aaKnown RBP12.28□□□□□ -0.44
SNX1-213ENST00000561026 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
SNX1-213ENST00000561026 ZNF773Q6PK81 442 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 OR5H6Q8NGV6 325 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 ISOC1Q96CN7 298 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 SLC25A38Q96DW6 304 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
SNX1-213ENST00000561026 GPHA2Q96T91 129 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 RNF167Q9H6Y7 350 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 FBXL7Q9UJT9 491 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 ETV7Q9Y603 341 aa12.28□□□□□ -0.44
SNX1-213ENST00000561026 DPPA5A6NC42 116 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 PPP5D1E7EU14 171 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 GGCTO75223 188 aaKnown RBP12.27□□□□□ -0.45
SNX1-213ENST00000561026 HRASP01112 189 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 CRYGCP07315 174 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 ZNF735P0CB33 412 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 PTHLHP12272 177 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 FCGR2CP31995 323 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 ARPC4P59998 168 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 MSMO1Q15800 293 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 IDNKQ5T6J7 187 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 C19orf35Q6ZS72 473 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 HOGA1Q86XE5 327 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 LAX1Q8IWV1 398 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 FANCD2OSQ96PS1 177 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 CCL28Q9NRJ3 127 aa12.27□□□□□ -0.45
SNX1-213ENST00000561026 RYR2Q92736 4967 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 A6NJ64 397 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 ZNF785A8K8V0 405 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 TNFSF12O43508 249 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 OR2C1O95371 312 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
SNX1-213ENST00000561026 AREGP15514 252 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 KIR2DS2P43631 304 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 RPL8P62917 257 aaKnown RBP12.26□□□□□ -0.45
SNX1-213ENST00000561026 DEFB114Q30KQ6 69 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 ZFAND6Q6FIF0 208 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 SSX9Q7RTT3 188 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 OR13F1Q8NGS4 319 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 SECTM1Q8WVN6 248 aa12.26□□□□□ -0.45
SNX1-213ENST00000561026 CSMD3Q7Z407 3707 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 LOC100506127A0A0U1RQW1 187 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 C2orf70A6NJV1 201 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 LGALS9O00182 355 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 NDUFB8O95169 186 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 DHFRP00374 187 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 PPYP01298 95 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 FOLR2P14207 255 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 HLA-GP17693 338 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 PSMB6P28072 239 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 CD81P60033 236 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 KLK9Q2XQG4 91 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 LINC00322Q6ZN03 302 aaPredicted RBP12.25□□□□□ -0.45
SNX1-213ENST00000561026 GPHB5Q86YW7 130 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 ZBTB34Q8NCN2 500 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 DYNLRB2Q8TF09 96 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 AIFM2Q9BRQ8 373 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 AUNIPQ9H7T9 357 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 BET1LQ9NYM9 111 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 KLK9Q9UKQ9 250 aa12.25□□□□□ -0.45
SNX1-213ENST00000561026 RBFOX2O43251 390 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX1-213ENST00000561026 TPPPO94811 219 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 IGHV3-23P01764 117 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 IFNA6P05013 189 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 CTRB1P17538 263 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 TIMM50Q3ZCQ8 353 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 CTRB2Q6GPI1 263 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 OR4A47Q6IF82 309 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 SPAG16Q8N0X2 631 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 CCDC140Q96MF4 163 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 NEURL2Q9BR09 285 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 PLEKHA3Q9HB20 300 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 DIABLOQ9NR28 239 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 SLC2A8Q9NY64 477 aa12.24□□□□□ -0.45
SNX1-213ENST00000561026 TECRQ9NZ01 308 aaKnown RBP12.24□□□□□ -0.45
SNX1-213ENST00000561026 DYNC2H1Q8NCM8 4307 aaKnown RBP12.24□□□□□ -0.45
SNX1-213ENST00000561026 CGB1A6NKQ9 187 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 CD7P09564 240 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 MYOD1P15172 320 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
SNX1-213ENST00000561026 EDN2P20800 178 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 ARL3P36405 182 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 CLEC19AQ6UXS0 136 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 GIMAP1Q8WWP7 306 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 SLC5A7Q9GZV3 580 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 HRASLSQ9HDD0 168 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 ZC4H2Q9NQZ6 224 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms