RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 DMBX1Q8NFW5 382 aa10.05□□□□□ -0.8
CTDSPL2-209ENST00000560620 FYTTD1Q96QD9 318 aaKnown RBP10.05□□□□□ -0.8
CTDSPL2-209ENST00000560620 ZMAT5Q9UDW3 170 aaKnown RBP10.05□□□□□ -0.8
CTDSPL2-209ENST00000560620 ADAM30Q9UKF2 790 aa10.05□□□□□ -0.8
CTDSPL2-209ENST00000560620 CCDC160A6NGH7 325 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 M0QYG6 137 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 OVOL1O14753 267 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 HPRT1P00492 218 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 RPA2P15927 270 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 RPL27AP46776 148 aaKnown RBP10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 SLURP1P55000 103 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 BRWD1-AS2P59051 145 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 KRTAP10-11P60412 298 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 ERVK-16P61578 105 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 MRGPRG-AS1Q2M3A8 158 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 ASPHD1Q5U4P2 390 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 LPCAT3Q6P1A2 487 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 C15orf40Q8WUR7 153 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 FCAMRQ8WWV6 532 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 TINAGL1Q9GZM7 467 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 C6orf62Q9GZU0 229 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 KLK11Q9UBX7 282 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 SCOCQ9UIL1 159 aa10.04□□□□□ -0.8
CTDSPL2-209ENST00000560620 HMX3A6NHT5 357 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 GPR31O00270 319 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 CTDSP2O14595 271 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 PRH1P02810 166 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 HSPB1P04792 205 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 NQO2P16083 231 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 MAS1LP35410 378 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 TAS2R31P59538 309 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 RPL8P62917 257 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 DGCR2P98153 550 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 EGFEM1PQ0D2K5 195 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 PHLDA2Q53GA4 152 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 RNASE10Q5GAN6 216 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 SLC25A42Q86VD7 318 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 LAX1Q8IWV1 398 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 PUSL1Q8N0Z8 303 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 OR52I2Q8NH67 350 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 DLX4Q92988 240 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 FXYD6Q9H0Q3 95 aa10.03□□□□□ -0.8
CTDSPL2-209ENST00000560620 SAP30O75446 220 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 S1PR2O95136 353 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 LY86O95711 162 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 CD3DP04234 171 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 PGAM2P15259 253 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 ECI1P42126 302 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 ADAD2Q8NCV1 583 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 DIRAS2Q96HU8 199 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 ABHD1Q96SE0 405 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 BCL7BQ9BQE9 202 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 MIXL1Q9H2W2 232 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 RANGRFQ9HD47 186 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 CCDC59Q9P031 241 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-209ENST00000560620 WI2-2373I1.2A0A1W2PRP0 233 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 DHFRP00374 187 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 DEFA4P12838 97 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 HLA-GP17693 338 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZP3P21754 424 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 F2RP25116 425 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 LPAR6P43657 344 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 RHOGP84095 191 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 ATP5G2Q06055 141 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 IL18Q14116 193 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 DYNC2LI1Q8TCX1 351 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 ISOC1Q96CN7 298 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 DGCR14Q96DF8 476 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 COMMD5Q9GZQ3 224 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 TMEM140Q9NV12 185 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 COMMD9Q9P000 198 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 MTFP1Q9UDX5 166 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 TNCP24821 2201 aa10.01□□□□□ -0.81
CTDSPL2-209ENST00000560620 FAM223BA6NKX1 122 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 MARCH11A6NNE9 402 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 H3BMQ9 156 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 K7EIL1 84 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 TPPPO94811 219 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 KRASP01116 189 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 REG1AP05451 166 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 IL6RP08887 468 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-209ENST00000560620 MYOD1P15172 320 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 INSL3P51460 131 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 TAS2R19P59542 299 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 SCGB2B2Q4G0G5 96 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 VAX1Q5SQQ9 334 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 TBC1D26Q86UD7 250 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF429Q86V71 674 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms