RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 FAM120AOSQ5T036 256 aa13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 MINOS1Q5TGZ0 78 aa13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 OSR1Q8TAX0 266 aaPredicted RBP13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 THAP6Q8TBB0 222 aa13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 ZDHHC16Q969W1 377 aa13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 TNFSF18Q9UNG2 199 aa13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 MINOS1-NBL1R4GNA1 71 aa13.91□□□□□ -0.18
CHRNA3-206ENST00000559658 MXRA5Q9NR99 2828 aa13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 ST8SIA3O43173 380 aa13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 SLC25A17O43808 307 aa13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 LYL1P12980 280 aa13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 HABP2Q14520 560 aaPredicted RBP13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 ZNF546Q86UE3 836 aa13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 TBL2Q9Y4P3 447 aaKnown RBP13.9□□□□□ -0.18
CHRNA3-206ENST00000559658 RBMXL2O75526 392 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 OR2F2O95006 317 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 HRASP01112 189 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 SNRNP70P08621 437 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 IL6RP08887 468 aaPredicted RBP13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 RRASP10301 218 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 IAPPP10997 89 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 MC5RP33032 325 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 PJVKQ0ZLH3 352 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 CLEC9AQ6UXN8 241 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 PUSL1Q8N0Z8 303 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 OR8H3Q8N146 312 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 COA4Q9NYJ1 87 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 H3BP45 60 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 ATG12O94817 140 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 OPN1MWP04001 364 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 OPN1MW2P0DN77 364 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 OPN1MW3P0DN78 364 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 F2RL1P55085 397 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 TNFRSF9Q07011 255 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 GPR157Q5UAW9 335 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 BSCL2Q96G97 398 aaPredicted RBP13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 BAHCC1Q9P281 2608 aa13.89□□□□□ -0.19
CHRNA3-206ENST00000559658 C15orf61A6NNL5 157 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 CHST1O43916 411 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 KBTBD11O94819 623 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 PAX9P55771 341 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 C10orf55Q5SWW7 151 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 RBKSQ9H477 322 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 HSPB7Q9UBY9 170 aa13.88□□□□□ -0.19
CHRNA3-206ENST00000559658 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 HMSDA8MTL9 139 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 UPK2O00526 184 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 GATA3P23771 443 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 OR4A16Q8NH70 328 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 C22orf15Q8WYQ4 148 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 EAF1Q96JC9 268 aaPredicted RBP13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 MFFQ9GZY8 342 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 SONP18583 2426 aaKnown RBP13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 NAV3Q8IVL0 2385 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 PIGBOS1A0A0B4J2F0 54 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 WRBO00258 174 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 CD1BP29016 333 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 TMEM65Q6PI78 240 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 TMEM14BQ9NUH8 114 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 BET1LQ9NYM9 111 aa13.87□□□□□ -0.19
CHRNA3-206ENST00000559658 E7EUB6 86 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 SYNGR2O43760 224 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 PET100P0DJ07 73 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 HKR1P10072 659 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 UBE2KP61086 200 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 HES1Q14469 280 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 PSG5Q15238 335 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 AARDQ4LEZ3 155 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 CYB5R2Q6BCY4 276 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 CCDC144NLQ6NUI1 221 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 BCL6BQ8N143 479 aaPredicted RBP13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 FBXL15Q9H469 300 aa13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 ZNF430Q9H8G1 570 aaPredicted RBP13.86□□□□□ -0.19
CHRNA3-206ENST00000559658 A0A1B0GW64 132 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 IGSF23A1L1A6 192 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 FAM24AA6NFZ4 105 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 FAM90A9PA6NNJ1 464 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 OOSP1A8MZH6 123 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 L7N2F9 121 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 CRYGBP07316 175 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 IL17RELQ6ZVW7 336 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 CLCC1Q96S66 551 aa13.85□□□□□ -0.19
CHRNA3-206ENST00000559658 J3QLI3 93 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 TSC22D2O75157 780 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 SSBP2P81877 361 aaPredicted RBP13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 MMDQ15546 238 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 Q8N6K4 173 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 TMEM167AQ8TBQ9 72 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 METTL1Q9UBP6 276 aaKnown RBP13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 TCF19Q9Y242 345 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 FOXA2Q9Y261 457 aaPredicted RBP13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 SETXQ7Z333 2677 aaKnown RBP13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 E5RGE8 158 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 FCN1O00602 326 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 MOSP00540 346 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 FSHBP01225 129 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms