RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-205ENST00000558534 DPF1Q92782 380 aa12.35□□□□□ -0.43
RABGGTA-205ENST00000558534 RSRP1Q9BUV0 290 aa12.35□□□□□ -0.43
RABGGTA-205ENST00000558534 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 DHFRP00374 187 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 PGAM2P15259 253 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 TNFSF8P32971 234 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 RPL8P62917 257 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 RUNX1Q01196 453 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 FAM209BQ5JX69 171 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 SPANXN2Q5MJ10 180 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 C8orf86Q6ZUL3 223 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 ZNF491Q8N8L2 437 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 DGCR14Q96DF8 476 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 SCGB3A2Q96PL1 93 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 PRRT1Q99946 306 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 FAM103A1Q9BTL3 118 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 ZNF430Q9H8G1 570 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 HRASLSQ9HDD0 168 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 TPSG1Q9NRR2 321 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 ZNF355PQ9NSJ1 428 aa12.34□□□□□ -0.43
RABGGTA-205ENST00000558534 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 M0QYG6 137 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 CCL24O00175 119 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 CYB5BO43169 146 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 RPA2P15927 270 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 DGCR2P98153 550 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 TERB2Q8NHR7 220 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
RABGGTA-205ENST00000558534 TNCP24821 2201 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 C13orf42A0A1B0GVH6 325 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 TRGV3P03979 118 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 TPPP2P59282 170 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 RND3P61587 244 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 PJVKQ0ZLH3 352 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 IDO2Q6ZQW0 420 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 HSD17B13Q7Z5P4 300 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 LHFPL1Q86WI0 220 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 USMG5Q96IX5 58 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 SRSF8Q9BRL6 282 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 TINAGL1Q9GZM7 467 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 COMMD5Q9GZQ3 224 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 SLC2A9Q9NRM0 540 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 FKBP11Q9NYL4 201 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 COPZ2Q9P299 210 aa12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 C14orf166Q9Y224 244 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-205ENST00000558534 PIGBOS1A0A0B4J2F0 54 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 MSGN1A6NI15 193 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 MARCH11A6NNE9 402 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 RAMP3O60896 148 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 SNAPC5O75971 98 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 SERPINE2P07093 398 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 OR9G9P0C7N8 305 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 HIST2H2BDQ6DRA6 164 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 SSX9Q7RTT3 188 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 MRPL41Q8IXM3 137 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 P2RX4Q99571 388 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 COA4Q9NYJ1 87 aa12.31□□□□□ -0.44
RABGGTA-205ENST00000558534 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 HLA-GP17693 338 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 LPAR6P43657 344 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 REC114Q7Z4M0 266 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 VKORC1L1Q8N0U8 176 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 SOSTQ9BQB4 213 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 TMEM140Q9NV12 185 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 ZNF257Q9Y2Q1 563 aa12.3□□□□□ -0.44
RABGGTA-205ENST00000558534 ANKRD20A5PA0PJZ0 165 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 H0Y980 276 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 I3L521 148 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 SOX15O60248 233 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 S1PR2O95136 353 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 HIST1H1BP16401 226 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 PIGPP57054 158 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 BRWD1-AS2P59051 145 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 SAMD5Q5TGI4 173 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
RABGGTA-205ENST00000558534 Q8N402 240 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms