RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 IGLV1-51P01701 117 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 HTR1FP30939 366 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 AQP2P41181 271 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 GDI2P50395 445 aaKnown RBP3.93□□□□□ -1.78
RTF1-204ENST00000558117 CXCL6P80162 114 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 DGCR6Q14129 220 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 C1orf140Q5VVS0 124 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 TBPL2Q6SJ96 375 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 SPATA12Q7Z6I5 190 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 TMEM179BQ7Z7N9 219 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 MKXQ8IYA7 352 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 HS3ST5Q8IZT8 346 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 SLC7A5P1Q8MH63 180 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OR5AS1Q8N127 324 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 NATD1Q8N6N6 113 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 GPR32P1Q8NGA4 272 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OR4D11Q8NGI4 311 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OR1N2Q8NGR9 330 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OR6N1Q8NGY5 312 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OR6N2Q8NGY6 317 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OR13G1Q8NGZ3 307 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 SFXN5Q8TD22 340 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 CYYR1Q96J86 154 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 SDF2Q99470 211 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 CCL13Q99616 98 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 CIB1Q99828 191 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 OSBPL10Q9BXB5 764 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 YTHDF1Q9BYJ9 559 aaKnown RBP3.93□□□□□ -1.78
RTF1-204ENST00000558117 LINC00527Q9UJ94 153 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 ANGPT4Q9Y264 503 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 AP3M1Q9Y2T2 418 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 V9GYY9 64 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 LALBAP00709 142 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 SMR3BP02814 79 aaPredicted RBP3.92□□□□□ -1.78
RTF1-204ENST00000558117 FADDQ13158 208 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 ATP6AP1Q15904 470 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 C5orf47Q569G3 176 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 TEX36Q5VZQ5 186 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 ZFP1Q6P2D0 407 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 IZUMO2Q6UXV1 221 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 LHFPL3Q86UP9 236 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 SLC30A8Q8IWU4 369 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 CBR4Q8N4T8 237 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 FAM216BQ8N7L0 139 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 OR8G5Q8NG78 346 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 OR2G2Q8NGZ5 317 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 OR52P1PQ8NH57 321 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 MFSD8Q8NHS3 518 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 ZNF502Q8TBZ5 544 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 ACOT11Q8WXI4 607 aaPredicted RBP3.92□□□□□ -1.78
RTF1-204ENST00000558117 ARPC1AQ92747 370 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 TMEM38AQ9H6F2 299 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 ARMC1Q9NVT9 282 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 CLN6Q9NWW5 311 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 SLC35A3Q9Y2D2 325 aa3.92□□□□□ -1.78
RTF1-204ENST00000558117 IGHV3OR15-7A0A075B7D8 119 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 IGKV1D-8A0A087WSZ0 117 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 TMEM213A2RRL7 107 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 CPSF4LA6NMK7 179 aaKnown RBP3.91□□□□□ -1.78
RTF1-204ENST00000558117 ODF3BA8MYP8 253 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 IGLL5B9A064 214 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 H3BN98 237 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 SMLR1H3BR10 107 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 I3L521 148 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 FAAHO00519 579 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 IFNA14P01570 189 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 HBE1P02100 147 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 HLA-DPB1P04440 258 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 FABP3P05413 133 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 ACSM4P0C7M7 580 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 OR8U9P0C7N5 309 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 GKN3PP0CG01 181 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 PGAM2P15259 253 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 COX7A1P24310 79 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 CXCR1P25024 350 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 CD200P41217 278 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 TGM4P49221 684 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 CRISP3P54108 245 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 AQP4P55087 323 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 BIDP55957 195 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 SELENOWP63302 87 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 SLC35B1P78383 322 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 HPCAP84074 193 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 ZNF616Q08AN1 781 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 GNA13Q14344 377 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 C5orf64Q2M2E5 130 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 OGFRL1Q5TC84 451 aaPredicted RBP3.91□□□□□ -1.78
RTF1-204ENST00000558117 UFSP1Q6NVU6 142 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 ZNF546Q86UE3 836 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 VN1R17PQ8TDU5 208 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 LZICQ8WZA0 190 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 H1FXQ92522 213 aaKnown RBP3.91□□□□□ -1.78
RTF1-204ENST00000558117 TMEM54Q969K7 222 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 CENPNQ96H22 339 aaPredicted RBP3.91□□□□□ -1.78
RTF1-204ENST00000558117 SLC38A1Q9H2H9 487 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 VCX3AQ9NNX9 186 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 IMPAD1Q9NX62 359 aa3.91□□□□□ -1.78
RTF1-204ENST00000558117 ZNF443Q9Y2A4 671 aaPredicted RBP3.91□□□□□ -1.78
RTF1-204ENST00000558117 TBL2Q9Y4P3 447 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms