RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CD37P11049 281 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 OMGP23515 440 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 NTSP30990 170 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 HTR5AP47898 357 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 TCTAP57738 103 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 PPP3R1P63098 170 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 GNGT1P63211 74 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 GNG3P63215 75 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 SRYQ05066 204 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 PLCXD2Q0VAA5 305 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ECH1Q13011 328 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 EDDM3AQ14507 147 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 RPEL1Q2QD12 228 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 DEFB113Q30KQ7 82 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ARHGAP11BQ3KRB8 267 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 HIST2H3PS2Q5TEC6 136 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 UQCC3Q6UW78 93 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF550Q7Z398 422 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 C8orf59Q8N0T1 100 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 C9orf62Q8N4C0 152 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 OR4M2Q8NGB6 313 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 OR2AE1Q8NHA4 323 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 TERB2Q8NHR7 220 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF675Q8TD23 568 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 TCTEX1D2Q8WW35 142 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 SRSF12Q8WXF0 261 aaKnown RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ASB13Q8WXK3 278 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 RAB8BQ92930 207 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 FLYWCH2Q96CP2 140 aaKnown RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 RCN3Q96D15 328 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 CMBLQ96DG6 245 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 CPNE2Q96FN4 548 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 CENPNQ96H22 339 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 OR7D2Q96RA2 312 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF382Q96SR6 550 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 EBPLQ9BY08 206 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 NIPAL2Q9H841 368 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 INPP5EQ9NRR6 644 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 CALML5Q9NZT1 146 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 VPS29Q9UBQ0 182 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF629Q9UEG4 869 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-209ENST00000556353 ZFP30Q9Y2G7 519 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 SIGLEC9Q9Y336 463 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 TIMM10BQ9Y5J6 103 aa3.04□□□□□ -1.92
PRPF39-209ENST00000556353 COL7A1Q02388 2944 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 DNAH7Q8WXX0 4024 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 A0A0B4J2E0 115 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 A0A0X1KG70 313 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 A0A1B0GX12 115 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 C20orf202A1L168 122 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 ISPDA4D126 451 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 LRRC30A6NM36 301 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 MANBAO00462 879 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 COPEO14579 308 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SLC2A5P22732 501 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SULT1A1P50225 295 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SULT1A2P50226 295 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 PIGPP57054 158 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 CKS1BP61024 79 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 NCALDP61601 193 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 COPZ1P61923 177 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 RRAS2P62070 204 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SKP2Q13309 424 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 BTN1A1Q13410 526 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 OR2F1Q13607 317 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 MAD2L1BPQ15013 274 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SURF2Q15527 256 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-209ENST00000556353 OR1Q1Q15612 314 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 HIST3H3Q16695 136 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 TMEM97Q5BJF2 176 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 TMEM128Q5BJH2 165 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 ACTL10Q5JWF8 245 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 LY6G6FQ5SQ64 297 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 NANOGP8Q6NSW7 305 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SCIMPQ6UWF3 145 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 UGT2A3Q6UWM9 527 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SLC16A13Q7RTY0 426 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 GALNT10Q86SR1 603 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 LINC01551Q86U37 167 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 IFNEQ86WN2 208 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 DHRSXQ8N5I4 330 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 PACRGLQ8N7B6 248 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF676Q8N7Q3 588 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 OR52I1Q8NGK6 324 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 OR1J4Q8NGS1 313 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 FNDC9Q8TBE3 224 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 Q8WTZ3 238 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 ORAOV1Q8WV07 137 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 BAALCQ8WXS3 180 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 APH1AQ96BI3 265 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 RPUSD4Q96CM3 377 aaKnown RBP3.03□□□□□ -1.92
PRPF39-209ENST00000556353 BTF3L4Q96K17 158 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 COL21A1Q96P44 957 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 APOL4Q9BPW4 351 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 SFXN3Q9BWM7 321 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 CDCA4Q9BXL8 241 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 REEP4Q9H6H4 257 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 ARMC7Q9H6L4 198 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms