RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IGKV1D-17A0A075B6S4 117 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 TRAV38-1A0A0B4J264 116 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 F2RL2O00254 374 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 DVL1O14640 695 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 GGCTO75223 188 aaKnown RBP5.8□□□□□ -1.48
TDP1-213ENST00000555880 CXorf1O96002 111 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 MT-CO2P00403 227 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 KLF3P57682 345 aaPredicted RBP5.8□□□□□ -1.48
TDP1-213ENST00000555880 LINC00205P59089 165 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 UBE2G2P60604 165 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 TCF15Q12870 199 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 OR5T1Q8NG75 326 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 TMEM170AQ8WVE7 144 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 SDSLQ96GA7 329 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 PLPPR2Q96GM1 343 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 ELOVL1Q9BW60 279 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 OPN3Q9H1Y3 402 aaPredicted RBP5.8□□□□□ -1.48
TDP1-213ENST00000555880 ZNF71Q9NQZ8 489 aaPredicted RBP5.8□□□□□ -1.48
TDP1-213ENST00000555880 TMEM140Q9NV12 185 aa5.8□□□□□ -1.48
TDP1-213ENST00000555880 IGHV3OR15-7A0A075B7D8 119 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TRGV8A0A0C4DH27 118 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 MDFIC2A0A1B0GVS7 189 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TMPRSS2O15393 492 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 NDUFB4O95168 129 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CRYAAP02489 173 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TYMSP04818 313 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 ARL14EPLP0DKL9 152 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 EGR1P18146 543 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CHRNA7P36544 502 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CFHR2P36980 270 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 ZNF83P51522 516 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TMPRSS3P57727 454 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 GAMTQ14353 236 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 RPL39P5Q59GN2 51 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 COA6Q5JTJ3 125 aaKnown RBP5.79□□□□□ -1.48
TDP1-213ENST00000555880 ACTL10Q5JWF8 245 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 XP32Q5T750 250 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 ALKBH2Q6NS38 261 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 IGFL2Q6UWQ7 119 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 LINC01551Q86U37 167 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 GCSAMQ8N6F7 178 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.79□□□□□ -1.48
TDP1-213ENST00000555880 PRSS33Q8NF86 280 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 RNASEH2CQ8TDP1 164 aaKnown RBP5.79□□□□□ -1.48
TDP1-213ENST00000555880 OR2V2Q96R30 315 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 IMMP2LQ96T52 175 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 MDFIQ99750 246 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 PRDM13Q9H4Q3 707 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CALYQ9NYX4 217 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 FUT9Q9Y231 359 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 PXMP4Q9Y6I8 212 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 PRR14LQ5THK1 2151 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TRGV10A0A0A0MS01 117 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 C15orf61A6NNL5 157 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 M0R1B8 84 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 ITGB1BP1O14713 200 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TNFSF13O75888 250 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 DEFA4P12838 97 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 BMP5P22003 454 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 VDAC2P45880 294 aaPredicted RBP5.79□□□□□ -1.48
TDP1-213ENST00000555880 ATP5G3P48201 142 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 THBS3P49746 956 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 SELENOVP59797 346 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 RHOBP62745 196 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 GNB1P62873 340 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CLEC12BQ2HXU8 276 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 GCSAMLQ5JQS6 135 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 FAM78BQ5VT40 261 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CDPF1Q6NVV7 123 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 MOGAT3Q86VF5 341 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 VKORC1L1Q8N0U8 176 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TMEM37Q8WXS4 190 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CORO2AQ92828 525 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 STARD4Q96DR4 205 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 ADTRPQ96IZ2 230 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 MGST2Q99735 147 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TMEM204Q9BSN7 226 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 GGTLC1Q9BX51 225 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 IFI27L2Q9H2X8 130 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 MS4A5Q9H3V2 200 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 NCOR1P1Q9H4R4 102 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 CHODLQ9H9P2 273 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 PATZ1Q9HBE1 687 aaKnown RBP5.79□□□□□ -1.48
TDP1-213ENST00000555880 NPVFQ9HCQ7 196 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 TCF19Q9Y242 345 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 SLC25A15Q9Y619 301 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 SVILO95425 2214 aa5.79□□□□□ -1.48
TDP1-213ENST00000555880 RRHO14718 337 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 WISP2O76076 250 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 GCGP01275 180 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 IGHV3-13P01766 116 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 IGHV3-7P01780 117 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 AMBPP02760 352 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 NPY1RP25929 384 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 DDTP30046 118 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 CCKARP32238 428 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 NBL1P41271 181 aa5.78□□□□□ -1.48
TDP1-213ENST00000555880 PDLIM4P50479 330 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms