RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CD3DP04234 171 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 APELAP0DMC3 54 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 EGR2P11161 476 aaPredicted RBP9.43□□□□□ -0.9
SRP54-206ENST00000555317 IGLL1P15814 213 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 NQO2P16083 231 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 S100A5P33763 92 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 MAS1LP35410 378 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 TAS2R31P59538 309 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 DGCR2P98153 550 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 PHLDA2Q53GA4 152 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 ETV3LQ6ZN32 361 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 ARRDC1Q8N5I2 433 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 WFDC9Q8NEX5 89 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 OR5T1Q8NG75 326 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 MYOZ3Q8TDC0 251 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 CASTOR1Q8WTX7 329 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 SMIM4Q8WVI0 70 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 SLIRPQ9GZT3 109 aaKnown RBP9.43□□□□□ -0.9
SRP54-206ENST00000555317 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 SOX15O60248 233 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 PGLYRP1O75594 196 aaPredicted RBP9.42□□□□□ -0.9
SRP54-206ENST00000555317 RAB3DO95716 219 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 OR8U8P0C7N1 319 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 RPL8P62917 257 aaKnown RBP9.42□□□□□ -0.9
SRP54-206ENST00000555317 MEF2DQ14814 521 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 SCGB2B2Q4G0G5 96 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 SLC25A42Q86VD7 318 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 TMEM229BQ8NBD8 167 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 OR11H1Q8NG94 326 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 OR1N2Q8NGR9 330 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 DGCR14Q96DF8 476 aaKnown RBP9.42□□□□□ -0.9
SRP54-206ENST00000555317 P2RX4Q99571 388 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 TINAGL1Q9GZM7 467 aaPredicted RBP9.42□□□□□ -0.9
SRP54-206ENST00000555317 GNB4Q9HAV0 340 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 PLEKHA2Q9HB19 425 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 COMMD9Q9P000 198 aa9.42□□□□□ -0.9
SRP54-206ENST00000555317 FABP12A6NFH5 140 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 ZNF701M0R085 212 aaPredicted RBP9.41□□□□□ -0.9
SRP54-206ENST00000555317 S1PR2O95136 353 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 LGALS1P09382 135 aaKnown RBP9.41□□□□□ -0.9
SRP54-206ENST00000555317 F2RP25116 425 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 RPL27AP46776 148 aaKnown RBP9.41□□□□□ -0.9
SRP54-206ENST00000555317 PPP5CP53041 499 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 UCP3P55916 312 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 BRWD1-AS2P59051 145 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 SSBP2P81877 361 aaPredicted RBP9.41□□□□□ -0.9
SRP54-206ENST00000555317 RUNX1Q01196 453 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 ZNF616Q08AN1 781 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 STEAP1BQ6NZ63 245 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
SRP54-206ENST00000555317 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
SRP54-206ENST00000555317 RSRP1Q9BUV0 290 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
SRP54-206ENST00000555317 MARCH11A6NNE9 402 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 DISC1C4P0D8 188 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 I3L521 148 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 CTDSPLO15194 276 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 OR9G9P0C7N8 305 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 AKAIN1P0CW23 69 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 HLA-GP17693 338 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 LPAR6P43657 344 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 BEAN1Q3B7T3 259 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 C10orf55Q5SWW7 151 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 ZNF486Q96H40 463 aaPredicted RBP9.4□□□□□ -0.9
SRP54-206ENST00000555317 COMMD5Q9GZQ3 224 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 NXF2Q9GZY0 626 aaKnown RBP9.4□□□□□ -0.9
SRP54-206ENST00000555317 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
SRP54-206ENST00000555317 TGP01266 2768 aa9.4□□□□□ -0.91
SRP54-206ENST00000555317 LINC01619G3V211 115 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 DHFRP00374 187 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 CD74P04233 296 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 SERPINE2P07093 398 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 RPA2P15927 270 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 TNFSF8P32971 234 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 ECI1P42126 302 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 FHL3Q13643 280 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 KIAA0141Q14154 515 aaPredicted RBP9.39□□□□□ -0.91
SRP54-206ENST00000555317 MRGPRG-AS1Q2M3A8 158 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 PYDC2Q56P42 97 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
SRP54-206ENST00000555317 ASPHD1Q5U4P2 390 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 REC114Q7Z4M0 266 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 TERB2Q8NHR7 220 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 USMG5Q96IX5 58 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 RBM38Q9H0Z9 239 aaKnown RBP9.39□□□□□ -0.91
SRP54-206ENST00000555317 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
SRP54-206ENST00000555317 SLC2A9Q9NRM0 540 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 COPZ2Q9P299 210 aa9.39□□□□□ -0.91
SRP54-206ENST00000555317 ZMAT5Q9UDW3 170 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms